Malus domestica (apple): 103402289
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Entry
103402289 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
mdm
Malus domestica (apple)
Pathway
mdm03030
DNA replication
mdm03410
Base excision repair
mdm03420
Nucleotide excision repair
mdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103402289
03410 Base excision repair
103402289
03420 Nucleotide excision repair
103402289
03430 Mismatch repair
103402289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdm03032
]
103402289
03036 Chromosome and associated proteins [BR:
mdm03036
]
103402289
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103402289
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103402289
DNA Replication Termination Factors
ELG1-RFC complex
103402289
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103402289
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103402289
Check point factors
HRAD17(Rad24)-RFC complex
103402289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad17
DNA_pol3_delta2
DUF815
AAA_16
Motif
Other DBs
NCBI-GeneID:
103402289
NCBI-ProteinID:
XP_070667689
LinkDB
All DBs
Position
02:complement(join(11517321..11517544,11517649..11517826,11518056..11518088,11518181..11518291,11518335..11518342,11518384..11519695,11520480..11520563,11520904..11521009,11521138..11521178))
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AA seq
698 aa
AA seq
DB search
MPAADPNAGEVFYRLMTGFMRNQTNYTLDSVLSKQDVLSAVVGLGGLGSKGVLKLLLVEE
LNKERVMSEFCALLEPQLKMENNGSRHRRNSLTPVKQRRSGYEPSDAETDILDSPWHGGN
KWPNGGYESGGAKPELDLGRKISPLRQSRRHSSRIEYDGPTPRTTSVVSPVRKRTNSKSP
YKPGRGDSNARTLPMAGSDIRRNISPLGKSERSRHVSPFQADQEERDLNNDGDEIVDSNR
NQHHKRTNSRRSAAALRHRSLRETDQQSNRSITPTKGERTPSPLSKSMAHQKPGQVSTPS
VSEINELLAHAKLARTSPDPILNNKAAPIYETSVSIAPGDIFFSGECNVVALPQNHLQKP
KMVSSAASQQRSTTRSNGNFGHDVNVRGLSSSYGLSQTTTTTSSSAVSRQSSGRLSMASS
MRSDASRTTTASMRKFTDNRRKSESQAWFSCMRKSSCKNKKLSPERSTFNEAAFIEKAFV
EESLRQLWADKHRPTSLNGFTCHKQEAQVLKQLVIPFVIDNVSPHILLTGPTGSGKKALT
MAYLREVYGDASWEISHDLRYFQVQEQRTMQLVVPLTSSPHHVELNVQLEPNARYALMGL
VREINNDNELAPEVSSINFKANHKVMVLYGVDKAEHIQHLIKWIMDCYSDACKLILCCEN
DSGVIESVKNRCKVIKVDAPVTHEVRITLGFRVPKMLF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagctgacccgaacgctggagaagtcttttacagattgatgaccgggttcatg
agaaaccagaccaattatactcttgacagtgtcttaagcaagcaagatgtcttgtccgct
gttgttggtctggggggacttggatccaaaggagttttaaagcttcttttggtggaagag
ttaaacaaggagagagtgatgagtgagttttgtgcacttcttgagccacaattaaaaatg
gagaataatgggtcaagacacaggaggaattctctgacgccggtgaagcaaaggaggagt
ggatatgagccatctgatgccgagacagacatcctagatagcccgtggcacggcggaaac
aaatggcctaatggaggatatgaatctggaggggcaaaaccagagttggatttgggaaga
aagatcagccctttgaggcagagcaggagacattcttccaggattgaatacgacggccct
actccaagaactacctcagtggtaagcccagttcgaaaaagaaccaacagcaagtcgccc
tacaagcctggaagaggtgacagcaatgctcgaactttgccaatggcgggttctgatatt
cgtaggaacatcagccccttgggaaaatccgagcgcagcagacatgtttcaccttttcaa
gcagaccaagaagagcgcgatttgaacaacgatggtgatgagattgtagactcaaacaga
aaccaacatcataaaagaacgaacagcagaagatcagcagctgctctgcggcatagatca
ctgagagaaactgaccagcaaagcaatcgttcaatcacgcctacaaaaggggagagaaca
ccctcaccattgtccaaaagcatggctcaccagaagccagggcaagtgagcacaccatcc
gtcagcgaaatcaatgaactgcttgctcatgcaaagcttgctagaacttctccagatccc
attttgaataacaaagctgctccgatttacgaaacctcagtttctattgcaccaggtgac
atctttttctctggagaatgcaatgtcgtggcattgcctcaaaatcacttacaaaaaccg
aaaatggtctcctctgccgcctcacaacagagaagtactactcgatcaaatggcaacttt
ggtcacgatgtcaatgtccgcggactttcatcttcgtatggtttgtcacagacaaccaca
accacttccagctctgcggtgagcaggcagagcagcgggaggctgagcatggctagcagc
atgaggagtgatgcaagcaggacaacaaccgccagcatgaggaagttcacggataatagg
aggaagagcgaaagtcaggcatggttttcgtgtatgagaaagagttcttgcaagaacaaa
aaattatcacctgagcgtagcacgttcaatgaggctgcattcatcgagaaggcgttcgtg
gaagagagtctcaggcagttgtgggctgataagcatagacctacttcgttgaatggattc
acttgccacaagcaagaagctcaagttctcaagcaacttgtgattccatttgtgattgat
aacgtcagtccacatattttgcttaccggaccaactggttctgggaagaaagctctaaca
atggcgtatctacgagaagtttacggtgatgcaagttgggaaatatctcatgatttgaga
tacttccaggttcaggaacaaaggacaatgcaactggtggttccattgacatccagccct
caccatgtggagctcaatgtacagttggaaccaaatgccagatatgccctaatgggtttg
gtcagagaaataaacaatgacaatgaacttgctcctgaagtcagctctataaatttcaag
gcaaatcataaagtgatggttctttatggtgtcgacaaagcagagcacattcagcacttg
atcaaatggatcatggactgttactcggatgcgtgtaagctcatactttgctgcgaaaat
gactccggtgtcattgaatcggtgaaaaaccggtgcaaagtcatcaaggttgatgctcct
gtgactcatgaagtacgtatcacattgggatttagggttcccaaaatgctcttttga
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integrated database retrieval system
