KEGG T03194: 103402718

Malus domestica (apple): 103402718

Entry

103402718         CDS       T03194

Name

(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

K03456

serine/threonine-protein phosphatase 2A regulatory subunit A

Organism

mdm Malus domestica (apple)

Pathway

mdm03015

mRNA surveillance pathway

mdm04382

Cornified envelope formation

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103402718
09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103402718
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103402718
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103402718
   03036 Chromosome and associated proteins [BR:mdm03036]
    103402718
Protein phosphatases and associated proteins [BR:mdm01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     103402718
Messenger RNA biogenesis [BR:mdm03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     103402718
Chromosome and associated proteins [BR:mdm03036]
Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     103402718

SSDB

Motif

Pfam:

HEAT PPP2R1A-like_HEAT HEAT_2 Vac14_Fab1_bd HEAT_EF3_N PDS5 HEAT_EZ Htt_N-HEAT_1 Adaptin_N CLASP_N Cnd1 TAF6_C TPR_TNPO3_IPO13_3rd

Other DBs

NCBI-GeneID:

103402718

NCBI-ProteinID:

XP_008339694

LinkDB

Position

16:join(3068596..3068988,3069479..3069725,3069842..3069954,3070182..3070261,3070479..3070620,3070734..3070814,3071421..3071525,3071733..3071915,3072091..3072183,3072496..3072635,3072732..3072798,3072897..3073016)

AA seq 587 aa
MSVVEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMREG
DLVNWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDTLKTELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVEPAHLKADVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMALVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAICLLAPVMGSEITCSKLLPVVVNAAKDRVPNIKFNVAKVLQS
LISIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQAIDHVMMSS

NT seq 1764 nt +upstreamnt +downstreamnt
atgtctgtggttgaggaaccgctatacccaatagccgttctcatagacgagcttaaaaat
gacgatatccagctgcggttgaactcaatccgcaggctatctacaattgcacgtgcgcta
ggggaagagcgaacccgtaaggagttaatcccttttctgagcgaaaacaatgacgatgac
gatgaggtgcttcttgcaatggcggaggagttgggggtcttcattccatatgttgggggt
gtggagcatgcacatgtgttgctcccgcccctggagaccctttgcactgttgaggaaacc
tgtgtgagggacaaggctgtggagtccttatgtaggattggatctcagatgagggagggt
gatttggttaactggtttattcctcttgtgaagaggttggcagctggtgaatggtttaca
gctcgagtctctgcatgtgggctttttcatattgcctaccctagtgcaccagatacattg
aagacagaactacgatcaatttacagtcagttgtgtcaagatgacatgcctatggttagg
aggtctgctgctacaaacctgggaaaatttgcagcaactgttgaacctgcgcatctgaaa
gctgatgtcatgtctatatttgaggatcttactcaagatgatcaagattctgttcgactc
ttggccgttgagggctgtgctgctttggggaagttgttggagccccaagattgtgttgca
catatcctccccgttatcgttaacttctctcaggataagtcttggcgtgtgcgttacatg
gttgcaaatcaactatatgagctttgtgaagctgtggggcctgagcatacgaggacggac
ctggttccggcatatgtgcgattgcttcgagataatgaggctgaagtacgcatagcagct
gctggcaaagttaccaagttttgccggattttaagtccagaacttgcaattcagcatatt
cttccttgtgtgaaggagctgtcatcagattcttcccaacacgtccggtctgctttggct
tcagttataatgggcatggcccttgtattaggaaaggatgcaacaattgagcagctcctt
cccatttttctttcactcctgaaggacgaatttccagatgtgcgccttaatatcattagc
aagcttgatcaagtgaatcaggttattgggatcgatttgctatctcaatccttattacca
gccatagttgagcttgcggaggatagacattggagggttcgacttgcaataatagagtac
atacctttattggcaagtcaactgggtgtagggttctttgatgataagcttggtgccctt
tgcatgcagtggttgcaggacaaggtctactcaattcgtgatgctgctgctaacaattta
aagcgtctagcagaagagtttggtccagaatgggcaatgcaacatattgttccacaggtc
cttgagatgataaacaatccacactatttgtatcgaatgacaattctgcgtgcaatctgt
ctccttgccccggttatgggttcagaaatcacatgttcaaaactgctgccagtggttgtc
aatgcggcaaaggacagagtaccgaacatcaaattcaatgttgcaaaggtgctgcagtcc
cttatctccatagttgatcagtctgtggtggagaaaacaattcgtccctctttggttgag
ctcagcgaggacccagatgttgacgttcgatttttcgctaaccaggcacttcaggcaatt
gatcatgtcatgatgtcaagctag

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