Malus domestica (apple): 103402733
Help
Entry
103402733 CDS
T03194
Name
(RefSeq) nuclear matrix constituent protein 1-like
KO
K27866
protein CROWDED NUCLEI
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103402733
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
103402733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRWN_N
CRWN_second_CC
Motif
Other DBs
NCBI-GeneID:
103402733
NCBI-ProteinID:
XP_008339711
LinkDB
All DBs
Position
16:join(3402666..3402965,3403102..3403311,3403394..3403647,3403815..3404085,3404180..3404263,3404839..3406946,3408012..3408216,3408326..3408547)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFTPQRKASTAALSLTPRSGGGVVSNPRNTEKGKAVVLVDGPPPPLGSLSESGPYTTVGF
DSGDMDDWRAFKEAGLLDEAAMDRKDRQALAEKVSKLQTELFSYQYNMGLLLIEKKEWAS
KHEELTEALVETQEILNREKSAHLIAVSEVEKREENLRRVLFAEKQCVAQLEKALLEMHE
EHAQIRHEAEAKMADASSFVVGIEEKSLETDAKLCAAYAKLGEVNRKSSELDMRLQEVEA
RESVLRREQFSLSAEQEAHKTTFYKQREELKEWERKLEEGEERLCKLQRTLNEKEEKSNQ
NDMIMKQREKDIEEAQRKIEALNTMLKEMEADVNKRLDDLVSKEKEANSVRNVLGLKEKD
LQEFEQKLSLQENVEIQEVLDKHRAILNTEIQEFELEMEERRETLNKELRSKVDGVEQKE
LEISHREEKLSKRKQALHEKSERLSEKNNELETKLKTLKENEKAIKANEKMLEVEKQQLL
ADIECLQNLRDEIQKIKDENLQLELQIREEREKQVITQEERSEHLRLLSELQQELRTYRL
QNELLLKETEDLKQQREKFEEEWEELDERKAEISRDLEKIVEEKENLEKLQGMEEERLKK
EKHAMQDYIQSEQDSLKLEKESFVSKMRNEQLALAEKAQFEHSQMVQDFESRNRDLEADM
QNREQEMKKGLQEMERAFEEEKDREHSNINYLKGVTNEQMEELRSERHRMEREREELALN
KKQQEVIQLEMRKDIGQLDILSKGIKQQREQLIEERRHFLSCVEKLKSCKDCGEMTREFV
LSDLQVSAVFQVEAVPLPRVNVDFLKNSPADSGVPELEYTESGWGTSLLRKCKSIVSKVS
PIKKLEHITDAGSSELPPVSTIQVNTEEKRNESNMLINEGARGHIGHEDEAGASFRMPND
SSAQPLPSDNTTKEVDDGCAPSIDDHSFIDSKVKDVPDDSEQSELKSGRQKPARGRKSRL
SRTRTVKATVEEAKKFLGDTPEEPSNASMLPNDSSYNHEESRGDSSFSEKANSSIGRKRM
HAQTSRITESEQDNCDSEGCSGSVATAGGRRKRRQPIASSVQTPGEQRYNLRHRKTTGSV
TAAPAAADLKKRNKEETGGGGVEPIPESVSVSSLGTAGENGRTTQLMQVTTLKSVEFSQE
RVVRFRTPKETVDDNAEADAAKSVENTELSAEDNGTPESGGGNNTNGESDDDYDDEDVEE
RPGEKSIGKKIWTFLTT
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgccgcagaggaaggcgtcgacggcggctctgtcgctgacgccgaggagcggc
ggcggcgttgtttcgaaccctaggaatactgagaagggtaaagcggtggtacttgtggac
ggtccgcctccgccattgggctcgctgagtgagagcggaccttatacgactgtgggattt
gatagcggtgatatggacgattggagggcgttcaaggaggccgggttacttgatgaggcg
gccatggaccgcaaggaccgccaagctctcgccgagaaggtctctaagcttcaaacagag
ctttttagttaccagtataatatggggcttcttctgattgagaagaaagagtgggcttcg
aagcacgaagaattgaccgaagctttggttgaaacccaagagattcttaaccgtgaaaag
tctgcgcacttgattgcagtatctgaggttgagaaacgggaggagaatttacggagagtc
ttgttcgctgagaagcagtgtgtagctcagctcgaaaaggctttgcttgaaatgcacgag
gagcatgcccaaataaggcacgaggccgaagcaaagatggctgatgcaagttcattcgtt
gtgggaattgaagaaaagtctttggagacagatgcaaagttgtgtgctgcttatgccaag
ctcggtgaggtcaacagaaagagttcagagttggacatgagattgcaagaggtggaggcc
cgcgaaagtgtgcttcgaagagagcaattttccttaagtgcggagcaagaggctcacaag
acaactttttacaaacaaagggaagaattgaaagaatgggagaggaagttagaagaaggg
gaagagaggttatgcaagcttcagagaactttaaatgagaaggaggaaaagtcaaatcaa
aatgatatgattatgaagcaaagagagaaggacattgaagaagcacaaaggaagattgaa
gctttgaacactatgttgaaagaaatggaagctgatgtgaataaacggctagatgactta
gtatcaaaggaaaaggaagctaattctgtgaggaacgtcttagggttgaaggagaaagat
ttacaggaatttgagcaaaaactaagtttgcaagaaaatgtggagattcaagaggtgctt
gacaagcacagagctattctcaatacggaaatacaggagtttgagttggaaatggaagaa
aggagggagactctgaacaaggaacttaggagcaaggttgatggggtggaacagaaggaa
ttggaaatcagccacagggaagaaaagttgtcgaagaggaaacaagcactgcatgagaaa
tcagagaggttgagtgagaaaaataatgaacttgaaacaaagctgaaaactttgaaggag
aacgagaaagccatcaaagctaatgagaaaatgttagaggtggaaaagcaacaattactt
gctgatatagagtgtcttcagaatcttagagatgaaattcagaagataaaggatgaaaac
cttcaactggagctccagattcgtgaagagagagagaagcaggtaattactcaggaagag
aggtcagagcacctccgtttgctgtcggaattgcagcaggaattaaggacttatagactt
caaaatgagttgcttttgaaggaaactgaagatttgaagcagcagagggaaaagtttgag
gaagagtgggaggaattggatgagagaaaagctgaaattagcagagatcttgagaaaatt
gttgaagagaaagaaaatttagaaaaattacagggcatggaggaagaaaggctgaaaaaa
gagaaacatgcaatgcaagattacatacagagcgagcaggacagtctcaagcttgagaaa
gaatcatttgtgtctaagatgagaaatgagcagttagccttagctgaaaaggcccaattc
gagcatagtcaaatggttcaagattttgagtcacggaatagagatcttgaggctgatatg
cagaatagggagcaggaaatgaagaaaggcctgcaggaaatggagagagcatttgaggag
gagaaggatagagaacattctaatattaattacttgaagggagtcactaatgagcaaatg
gaagaattaagatctgaaaggcatagaatggaaagggaaagggaagaacttgctctgaac
aagaagcagcaagaagttatccaacttgaaatgcgcaaagacattggtcagcttgatatc
cttagcaaggggatcaagcagcagcgggaacaacttattgaggaaagacgacacttcctt
tcttgtgttgagaagctgaaaagttgcaaggactgtggagaaatgacaagggaatttgta
ctttctgatctccaggtatcggcagtgttccaagttgaggctgttcctctgccgagggtc
aatgttgattttttaaagaactctccagctgattcaggtgttcctgaattggaatacaca
gaatcaggatggggaacatctttgctgcgcaaatgcaagtcaattgtttctaaagtatct
ccaattaaaaaactggagcatattactgatgcagggtcttcagagttgcccccagtatca
actattcaagttaatactgaagagaaaagaaacgagtctaatatgcttattaatgaggga
gcaagagggcacatcggtcatgaagatgaagctggggcatcctttaggatgcctaatgac
tctagtgctcaaccactaccatctgataacaccaccaaggaagtggatgatgggtgtgct
ccatcaattgatgatcatagcttcattgacagtaaggtgaaagatgttcctgatgattct
gagcaatccgagctgaagagtggtcggcaaaaaccggctaggggacgcaagtccagactg
tctaggacacgcaccgtgaaggcaacagttgaagaggcaaagaaatttctaggagatact
ccagaagaaccatcaaatgcaagtatgctgcctaatgatagtagttacaatcatgaagaa
agtcggggtgattccagtttttctgagaaagctaatagtagcattgggaggaaacgaatg
catgctcagacctctaggattactgaaagtgagcaagataattgtgacagcgaaggatgt
tctggcagtgtcgcaacagctggtgggcgcaggaagaggcgacaacccattgcttcctcc
gtgcaaacacctggagagcagcgatataatctcagacatcgcaagactacaggatcagtc
acagcagcaccagccgcggctgacctgaagaagagaaataaggaagaaactggaggtggt
ggtgtagaaccaattcctgaatctgtttctgtatcgtcgttggggacggctggtgagaat
gggcggactacacagttgatgcaggtcaccacattgaaaagtgtggaattctcacaggag
cgggttgtgaggtttagaacaccaaaagaaaccgttgatgacaatgccgaagctgatgca
gcaaaatcagttgaaaatacagagttgagtgcagaagataatggtacaccggaatctggt
ggcggcaacaatacaaatggcgagagcgacgatgattacgatgacgaggacgttgaagag
cgtccgggcgagaagtcaataggaaagaagatctggactttcttgacaacgtga
DBGET
integrated database retrieval system