KEGG   Malus domestica (apple): 103402964
Entry
103402964         CDS       T03194                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103402964
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     103402964
    REST complex
     103402964
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103402964
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress PAH_ZNF598 HHD_RTEL1
Other DBs
NCBI-GeneID: 103402964
NCBI-ProteinID: XP_008339974
LinkDB
Position
16:join(5787960..5788033,5788534..5788698,5788813..5789002,5789084..5789182,5789275..5789436,5789548..5789812,5790146..5790282,5790391..5790466,5790543..5790572,5790800..5791077,5791175..5791329,5791669..5791796,5791920..5792174,5792520..5793215,5793368..5793438,5793700..5794350,5794601..5794704,5794782..5794920,5795017..5795169,5795263..5795426,5795507..5795615,5795782..5795934)
AA seq 1417 aa
MKRSRDEVFMSSQLKRPVVSARGEPSGQPQMMAAAAAASQKLTTNDALAYLKAVKDIFQD
KNRGKYEEFLEVMKDFKATRIDTAGVIERVKDLFKGHRELILGFNTFLPKGYEITLPLDD
DQQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSIQEVYQEVAAL
FQDHPDLLVEFTHFLPDTTGTASIHPPHRNSMLRDRSSAMPTMRQMHADKKERTVGSYAD
HDLSVDRPDPDHDKALMKADKEQRRRGEKEKERREDRERRERDDRDFDHDGSRDLNMQRF
PHKQKSARRTEDTEQLQPGMYGQEFAFCEKVKEKLRNPEDYQEFLKCLHIYSKEIITRSE
LQSLVADLIGRYPELMDGFDDFLACCEKKDGFLAGVMSKKSLWNEGHLPRSVKVEDRDRD
RDRERDDGVKDREHETRERDRLDKNGAFGIKEVGGQKSLYSSKDKYLAKPINELDLSNCE
RCTPSYRLLPKNYPIPSASQRTELGFELLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
EDDRFELDMLLESVNVTTKRVEDLLEKINNNTIKMDSPIRIEDHFTALNLRCIERLYGDH
GLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYF
KQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPIIPNLEFEYPDPEIHEDLY
QLVKYSCGEVCTTEQLDKVMKIWTTFLEPILGVPTRPQGAEDTEDGVKAKNLAVKSGSLS
PGESDGSPDGDATLTNSKQLNSSRNGDESIQPEQSSSCRTWTVNGANGVKEESCLNIDHA
ACEGDTLYNTSRQGKVQSNTSPAEETSGVGKQDNFNERLVNSNVSLATGLEQSNGRTNVD
HSSGHSSTPSRPGNGTVDVGLELPSSEGGDSTRPGISLNGAVAEGAVGLRYLEESARHFK
IDREEGEISPNGDFEEVNFANYREAGSEAVQKPKDGTVSRQYQARHGEEEICGGETGGEN
EADADDEGEESAPRSSEDSENASENGDVSGSESGDGEECSREEHEEDGDNDEHDTKAESE
GEAEGMADAHDVEGDGISLPLSERFLSTVKPLAKYVPPALHDKEKDSRIFYGNDSFYVLF
RLHQTLYERIQSAKINSSSAERKWRASSNETSPTDSYARFMNALYNLLDGSSDNTKFEDD
CRAIIGTQSYLLFTLDKLIYKLVKQLQTVASEEMDNKLVQLYAFEKSRKPGRFVDVVYHE
NARVLLHDENIYRIECASSPTRVSIQLMDFGHDKPEMTAVSMDPNFSAYLHDEFLSVLPD
KKEKSGIFLMRNKRKYGSDDLSAICEAMEGLKVANGLECKIAYHSSKVSYVLDTEDFLFR
TKKKRKSLHQNGSCHNLARSSNGSSRVERFQRLLSGS
NT seq 4254 nt   +upstreamnt  +downstreamnt
atgaagaggtccagggacgaagtttttatgagctcgcaactcaagcggcccgtggtttcc
gctcgaggagagccttctgggcaaccccagatgatggcagcagcagcagcagcttcccaa
aagctaacaacaaatgatgccttagcttatctaaaagcggtgaaggatatatttcaagac
aaaaacaggggaaaatacgaagaatttcttgaagtcatgaaagacttcaaggccacaaga
attgacactgcgggtgtgatagagagggtgaaagatttatttaaagggcatcgagagcta
atattaggtttcaataccttcttgccaaagggatatgaaataaccctcccacttgatgat
gaccaacaacctcctcaaaagaagcctgttgaatttgaggaagccatcaattttgtgaac
aagattaagacacgatttcaaggcgacgaccatgtttataaatcttttttagacattctg
aatatgtacagaaaggaaaacaagtccatccaagaggtttaccaggaggttgctgcactt
ttccaagaccacccagatttgcttgtggagtttacccactttttacctgatactacagga
acggcttccattcatccacctcacagaaactcaatgcttcgggataggagctctgcaatg
cctactatgcggcagatgcatgcagacaagaaggaaaggaccgtgggttcttatgctgac
catgatctcagtgttgaccgtcctgatcctgaccatgataaagctctgatgaaagcagac
aaagagcaaaggaggcgtggcgagaaggagaaggagaggagagaagacagagaaagaaga
gaacgggatgatagggattttgaccatgatggcagtagagacctcaatatgcagcgtttt
ccccacaaacagaaatctgctcgtaggactgaagacactgaacaattgcagccaggtatg
tacggccaggagtttgctttctgcgagaaggtgaaggagaagttacgaaatcctgaagat
taccaggaatttttgaagtgccttcatatttatagcaaggaaattattacacgctctgaa
ttgcagtctttggtggctgatttaattggaagatatcctgaacttatggatgggttcgat
gattttttggcatgttgtgagaagaaagatgggttccttgctggtgtcatgagtaaaaaa
tccttgtggaatgaaggacatttacccagatcagtgaaggtagaagatagggatagggat
agagatcgtgaaagggatgatggggttaaagatagagagcatgaaactcgagaaagagat
agacttgataaaaatggtgcctttggaatcaaagaagttggaggccagaagagtttatat
agcagcaaggataaatatttggcaaaacccattaatgagcttgacctctccaattgtgag
cgctgcactccgagctatcgtctcctgccaaagaactatccaataccttctgctagccaa
agaacagagcttggttttgaactattaaatgaccactgggtatctgttacttctggaagt
gaggattactcttttaaacacatgcgcaaaaaccagtatgaagaaagcctgtttcggtgt
gaggatgacaggtttgaactggatatgttgttggagtcagtgaacgtaacaaccaagcgc
gtggaagatctattagaaaagatcaacaacaatacaattaagatggacagtccaattcgt
attgaagatcacttcacagctctgaacctaaggtgcattgagcgattatatggtgaccat
gggcttgatgtgatggacgtgttgaggaaaaatgctccactagctttgcctgtcatattg
acccgtttgaagcaaaagcaagaagagtgggcaaggtgtcgttcagattttaataaagtt
tgggctgatatatatgccaagaactatcacaagtcacttgatcatcgtagcttctacttt
aagcaacaagacaccaagagcttaagcacaaaagccttgttggctgagattaaagagatt
agtgagaagaagcggaaggaagatgatgttcttcttgctattgctgctggaaatagacga
cctattattccgaatttggaatttgagtaccctgacccagaaatccatgaagatctgtat
caactcgtcaaatattcttgtggagaagtttgcacaaccgagcaattggataaagttatg
aagatatggacaacttttcttgaaccaatactaggtgttcctacgcggcctcaaggtgca
gaggataccgaagatggtgtgaaagcaaaaaatcttgctgtaaagagtggttctttgagt
cctggagagagtgatggtagtcctgatggtgatgctactctgacgaattccaaacagttg
aattcatcaagaaatggagatgaaagcattcaacctgaacaatcaagctcttgcaggact
tggacagtaaatggggctaatggggtcaaagaagaaagttgtctcaacattgatcatgct
gcatgtgaaggggatacattgtacaatacctctcgacaaggtaaagtgcagagtaacaca
tctccagctgaggaaacgtctggagttggcaaacaagacaatttcaatgaacgattagtg
aattctaatgtatcacttgccactgggttggagcaaagtaatggaagaactaatgtagac
cactcatcagggcatagttctactccgtccagacctggtaatggcactgttgatgttggg
ctggagttaccttcatcagagggtggtgattctacaagaccaggtatttccttaaatgga
gcagtagcggaaggcgccgtaggtctcagatatcttgaagagtctgctagacacttcaag
attgatagagaagaaggcgagatatctccaaatggagatttcgaggaggttaattttgca
aattatagagaagctggttcagaggctgttcaaaaaccaaaggatggtactgtcagcagg
caatatcaagccagacatggggaagaagaaatatgcggtggagagacaggtggagaaaat
gaagctgatgctgatgatgaaggtgaggaaagtgctccgaggtcatctgaggatagtgag
aatgcctctgagaatggtgatgtttctggaagtgaatctggtgacggagaggaatgttct
cgtgaagagcatgaggaagatggggataatgatgagcacgatactaaggccgagagtgaa
ggtgaagctgaagggatggctgatgcccatgatgttgaaggagatggaatatctttgcct
ctttcagaacgttttctctcgactgtgaagcctcttgcaaagtatgttcctccagcttta
catgacaaggagaaggactctcggatattttatggaaatgattctttctatgtgctattc
aggcttcaccaaaccttatatgagagaatacaatcagcaaagattaactcatcatctgct
gagaggaagtggcgggcttcttcaaatgagacaagccctacagactcttatgctagattc
atgaatgcactttacaatttacttgacggttcttctgacaatacgaaatttgaagatgat
tgtcgagccatcattgggacacagtcatatcttttattcacattagacaagctgatctac
aaactcgttaagcagctccaaacagttgccagtgaagagatggacaacaaactcgttcag
ctttatgcatttgaaaaatcaagaaaaccaggaagatttgtagatgtggtttatcacgaa
aatgctcgcgttcttcttcatgatgagaacatttaccgcatcgaatgtgcatcctctcca
acccgggtgtctattcagctaatggattttgggcatgataagcctgaaatgactgctgtt
tctatggaccctaatttttctgcgtatctgcatgatgaattcctttcagttcttcctgac
aaaaaggagaagtccgggatcttcttgatgaggaacaaacgtaagtatggcagcgatgat
ttgtctgctatctgtgaggccatggaaggactaaaagtcgctaatggtctggagtgtaag
atcgcttaccattcatccaaggtctcatacgttttagatacagaagactttctgtttcgg
acaaagaagaaaaggaaaagtttgcaccagaacggttcatgccataacctggctaggtct
tctaacggttctagtagagtagagcgatttcagcggttgctttctggctcatga

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