KEGG   Malus domestica (apple): 103403077
Entry
103403077         CDS       T03194                                 
Name
(RefSeq) coilin-like
  KO
K13150  coilin
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103403077
Spliceosome [BR:mdm03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    103403077
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 103403077
NCBI-ProteinID: XP_008340120
LinkDB
Position
16:join(7133679..7133885,7133963..7134027,7134127..7134408,7134738..7134974,7135176..7135245,7135355..7135432,7135765..7136032,7136236..7136276,7136467..7136664,7136967..7137038,7137119..7137265,7137491..7137632,7137713..7137900)
AA seq 664 aa
MMTTTTTDGVRLRVAFKERHILSKSQRTQGLRRSWILLKPHHRTISNLAAYLLHAFDLHR
SCPDGLLISMDGFVLPPFESTSIFKDEDIISVNRKEGTLSEIALLDDGTDAIEVEEIVER
QPMNTRMKLLANEEFEKETGGYDSDSEEDGSDQLEDLFPVENPPDNGSNRRSKKRKLSDK
PQSSKRKRIKSSATEECSGLPEGLQNDVRAEKTKSSHQSRVLAKKRHSKMDKSFTVEDGL
DNSSTRKTDERIDGISKSMPNGKRSCQLQENEKKGVVSSETPGESKKLPSRSARRKKAKR
QWLREKMKAEKEELHQTQLLKTNNQQSTGKDNQKCPEEHQQPNTNNEEEEEQSDTDSDGE
DEQMKIDNNEVVKQPYTDNDKEDDIVPVVIRPGHIRFEPLAKVDKDQPIQQNTTPVETFR
WNGITSKKRGQIWGMEKTSHSRTSDYNDLNQESPGVPDIEKEIPVNDHIDFNKLELCTTL
PKKGDQIAYCLIELTSCWTPEVSSYRIGEVSRYDPQSNKIMLVQVPEYPIVFAGTDEGSD
VVPDTSLYGQDRSLEVDYSSLFDVRIVKHGNLNTAKPVTGDQNVASGSRQLDKDMETHAA
TKENGKASAWDEISQAFNAKKAELSQEENGWSKNDGSVRSSWSYRGLRGSALGPVVARLR
AQGH
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgatgacgacgacgacgacggacggcgtgaggcttcgggtggcatttaaggagcgtcac
attctgagcaagtcacagaggacacaaggactcaggcggagctggattctactcaaacct
caccaccgcaccatctccaacctcgccgcctatctcctccacgctttcgacctccaccgt
tcttgccccgatggtctcctcatctccatggatgggtttgtgcttccgcctttcgaatcc
acctccattttcaaggatgaagatattatcagtgtgaataggaaagagggcacattgtct
gaaattgcactgcttgatgatggaacagacgctattgaggtggaggaaattgtggagagg
caaccgatgaatacgcgtatgaagcttctggctaatgaagaattcgaaaaggagactgga
ggatatgatagtgattcggaagaggatggatctgaccaattggaggatttatttcctgtt
gagaatccacctgacaacggttcaaacagacggtccaagaaaaggaagctttcagataaa
cctcagagttcaaagaggaagagaattaaatcttccgctaccgaagaatgttctggttta
cctgaaggccttcagaatgatgtccgtgcagagaagacaaaaagttctcatcagtctcgt
gttctcgccaaaaagagacattccaagatggacaagtcatttactgttgaggatggactg
gataattcaagcacccgtaagactgatgaaagaattgatggaataagtaaatcaatgccc
aatggaaagagatcctgtcagcttcaagagaacgaaaaaaagggtgtggtttcatctgaa
acgcctggtgaaagtaaaaagcttcctagtagaagtgctcgacgtaaaaaggccaaaagg
caatggttgagggaaaaaatgaaagctgagaaggaagagttgcatcagacgcaattgctc
aaaacaaataatcagcaatcaacgggtaaagataatcagaaatgtcctgaagaacaccag
caaccaaacacaaacaatgaagaagaggaggaacaatcggacacagatagtgacggagag
gatgagcaaatgaaaatagataacaatgaagtagttaagcaaccatacacagataatgat
aaagaggatgatattgttcctgtagtaattagaccaggacatattcgatttgaacctcta
gcaaaagtggacaaagatcagcctattcagcagaatacaactccagtggaaacttttcgg
tggaatggaataaccagcaagaagaggggtcaaatatggggtatggagaaaacatcacat
tcaagaacaagcgactacaacgatctgaatcaagagtcacctggagtaccggatattgaa
aaagagatccctgtgaatgatcacatagacttcaataagcttgagctctgtactacttta
cctaagaaaggtgatcaaattgcatattgtttgattgaattaacatcgtgctggactcct
gaagtttcctcataccgaattggagaagtgtcacggtatgaccctcaatcaaataagatt
atgctagtacaggttccagagtatcccattgtttttgcggggacggatgagggatctgat
gtagtgccagatacatccctttacgggcaagatcgctctctagaggtagattattcttca
ctttttgatgtccgcattgttaagcacggcaacctcaacacagcaaaaccagtcactgga
gatcaaaatgttgcatcaggatccaggcagctcgacaaagacatggaaactcacgctgct
acgaaagaaaatggaaaggcaagtgcatgggatgaaatcagccaggcatttaatgcgaag
aaggcggagctgtcgcaggaggagaacggttggagtaaaaacgatggttcggtgaggagc
tcatggtcgtataggggcttgagaggtagcgcgttaggtccagtagtggctcgtttgaga
gcgcaagggcactaa

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