Malus domestica (apple): 103403193
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Entry
103403193 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103403193
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103403193
Surveillance factors
Other surveillance factors
103403193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
103403193
NCBI-ProteinID:
XP_008340247
LinkDB
All DBs
Position
16:complement(join(8839374..8839705,8839894..8840036,8840158..8840218,8840328..8842499,8842594..8843292,8843397..8843546,8843622..8843715,8843813..8844661,8844976..8845046,8845185..8845247,8846206..8846281))
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AA seq
1569 aa
AA seq
DB search
MAEGKLDLPDDLLSSKPSDQSWTSKVEASGGNDEEKVLIGSSDDSKDPAASESIPLSPQW
LYAKPSESKLEMRGPSSLGNSTDSNQKEGWRLEGSDDKKDWRRPATESESSRRWREEERE
TSLLGGRRDRRKPERRVDSVPVRDTTDNRALPASERWNDGRTSAHEARRDSKWSSRWGPE
DKEKETRTEKKTDVEKEYAHSNSDNQSLGGNNRSASERESDSRDKWRPRHRDLHSGGSNA
YRAAPGFGLEKGRVEGSNLGFTLGRGRASGVGRSSAGVIGSAPSGKSESVPGKPRHSADS
FCYPRGKLLDIYRQRKLDLSFATMPDEMEESPPTTQVGFVEPLAFLAPDGEEEAILSDIW
NGKITSSGVVYNSFRKGRSTENNTGGGDLEAVDGVLGILPSSITEETNNILQESANADDY
GTSWNSGAQRNVVDEKDVNHKEWETKSSAEKDLDGFSQTFQKSNGICSDVETDGGSRKNE
ASFLSSHSLSNDIEFATSDLRSKLHDGSNTLYAFGSSEQNLNNNSRVKELERDVPPEDLC
LYYLDPQGAVQGPYLGVDIISWFEQGFFGTDLPVRLADTPEGTPFKELGEVIPHLKVWDA
HGNIVNPTSHIEESSGSLGNIESSLPSSDLNSLSTLHIQPRNSEPEAPLQLPHSTGQSFN
DFCAEDEDIVFPGIPGTTGYSTARSSGAIHDSIENSIGHLPSPTELTESGVPIQNDNKLH
PFGLLWSELEGGQTKQVKPANRPSNMGRAVPFSGISDTAILAETWSDVHRKNAVSDTSLY
QDMVAPRQLAHMEQEPSHYDLAEQLMSQQIRQQQLQQRNMLSSFGHLNDAALEHLPSQNL
IHQQLANHSSADLDHLLALKMQQHREAQLQQHQQLQQQQFHHQQKLLQEQQQSQLQQVLL
EQLLRGQMHDPALRQPHIDPVRANNVIEQVLLEQRLMHELQQRSHHFPRHVDPSLEQLVQ
AKFGQSPPQADFLDLLSRAQHEQIQSLEHQMQARQLPTGMRQRMEDDRHGGSVWPADESN
QFLRTHAGAQRAHSSGFSPLEFYQKQQRPSHEEQLSQLDRNLSLQDRLQQGFYEPGSHPF
ERSMSLPAGAQGMNLDAVNAMARAQGLDMQDSLGRMPSGGQLGTFSSGIHSHNPHHPLPN
QFHASHLDAIEGHWPEKNEQLENDWMDSRFQQLHINAERQKRESEINIPSQDRGLWMSDG
LNEEHSKRLLMELLHKKSAHQPAESLNVNNGIFSDKRPSSGMYSGSSSSSHPFSLHSDQE
AGLNNSFRVGSYGSNHMELPQEERASSMESNEKLVYRSDSGALVERESFLAGINATSQPI
YTNSNIISKSSISKEVSELEGRKRGTKSEGIIRGQAFDTREQMVEQAVLAAPDYEERSAN
SLNMRSSSGVSGFHSDKIGRSNSFAEETTRDRVPAPSKTQDNILLRRPPVSSASASHEGL
SELISNPVFRGQSASAAPDGGRQDPVVVHPVNQGSDALPSSSKKEIQFRRTSSTSDADVS
EASFMDMLKSNTKKLAPTDAHATAGEDAMQGNRSGKKKGKKGRQIDPALLGFKVTSNRIM
MGEIHRIDD
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcaagctcgatctgcccgacgatctcctctcctccaaaccctccgatcag
tcctggacctccaaagttgaagcctctggaggaaatgatgaagaaaaggtgcttattggg
tcatctgatgactcgaaagatccagctgcctcagagagcatacctttgtccccccagtgg
ctttatgccaaacccagtgagtctaagttggaaatgcgcggcccaagttcccttggaaac
tctactgatagcaaccagaaggaaggttggcgtttggaaggatctgatgacaaaaaagat
tggaggcggcctgccactgaaagtgaaagtagccgtcgttggcgtgaagaggaaagagaa
actagcttgcttggtggcagaagagaccgaaggaaaccagaacgccgtgtcgacagtgtt
ccagtgagagacacaactgacaatagggcactgcctgcatctgaaaggtggaatgatggc
cgtacttctgcacatgaagcacggcgtgatagcaaatggtcatcaaggtggggtcctgaa
gacaaagaaaaggagactcgaactgaaaagaaaacagatgtggagaaggaatatgctcac
agtaacagtgacaatcaatcccttggaggtaacaaccgttcagcttctgagcgcgagtca
gattctcgggataaatggaggccacgccatagggatcttcactctggtgggtcaaatgct
taccgtgctgcaccaggatttggacttgaaaaaggacgggtggagggttcaaatttggga
tttacccttggaagagggagggcatctggtgtcgggagatcatctgcaggtgttattggc
tctgctccttctggaaaaagtgaaagtgttcctgggaaacctaggcactcagctgatagt
ttttgctacccaaggggaaagcttcttgacatttatcgccagcgaaagcttgatctatct
tttgctaccatgccagatgagatggaagaatcgcctcctacaactcaagtgggctttgtg
gagccattagcttttcttgcccccgatggtgaagaggaggccatcctcagtgatatatgg
aacggaaagattacaagtagtggggtagtatacaattcatttagaaagggaagatcaact
gaaaacaatacaggtggcggagacttggaagctgttgatggagttctgggtattttgccc
tcgagcatcaccgaagagacaaacaatatcttgcaggagtctgcaaatgctgatgattat
gggacttcatggaattctggtgcacaaaggaatgtggtagatgaaaaagatgtcaatcat
aaagaatgggaaaccaaatctagtgcagaaaaggaccttgatggattttctcaaacattt
cagaaaagtaatggtatctgcagtgatgttgagactgatggtggcagtaggaaaaatgaa
gcttcttttttatccagccattctttgtcgaatgacattgagtttgcaacttctgactta
agatcaaaacttcacgatggttcaaatactctctatgcttttggctcgtctgagcagaat
ctgaataataattctcgggtgaaagagttagaaagggatgtccctcctgaggatttatgt
ttgtattaccttgatcctcaaggggcggttcagggaccatatttgggggtagacattatt
tcatggtttgaacaagggttttttgggacagacttgcctgttcgattggcagatactcct
gaaggaacacctttcaaagaattgggggaggtcattccgcatctgaaagtttgggatgcg
catgggaatattgtaaatccaacttctcatatagaagaatcaagtggctccttagggaat
atagagtctagcttaccttcttccgatctaaatagcctttcaactctgcatattcaacct
agaaattctgagcctgaagctccactacaactgccacattcaacgggtcaaagctttaat
gatttttgtgcagaagatgaagatattgtgtttccaggaatacctggaaccaccggctat
tctactgcaagatcttctggagccattcatgattctattgaaaattctattggccacctt
ccttctccaactgagctgacagaatctggtgtgcctattcagaatgataataagttgcac
ccctttggcttgctttggtctgagttagaaggcggtcaaacaaaacaagtcaagccagcc
aataggccttctaacatggggagggctgttccatttagtggaatttctgatacagcgatt
cttgctgagacatggtctgatgttcatagaaaaaatgcagtctctgatacaagcctgtat
caagacatggtagccccacgtcaattggcacacatggaacaggaacccagtcattatgat
ttagcggagcagcttatgtcacagcaaattcgacagcagcagctccaacagcggaatatg
ttgtctagctttggacacttgaatgatgcagcattagagcatttgccaagtcagaatctt
atccaccaacagttagccaaccattcttcagcagatctggatcatcttttggcacttaag
atgcaacagcaccgggaggctcagctccagcaacatcagcaactgcaacagcagcagttt
catcaccagcagaagcttttacaggagcaacagcagtcccaactgcaacaggtgcttctt
gaacaactgctgcgtggtcaaatgcatgatcctgcgcttaggcagccacacattgatcct
gtcagagcaaacaacgttattgaacaggttctattagagcagcgccttatgcatgaactc
caacaaaggtctcaccattttccaaggcatgttgatccatctttggagcagcttgtccaa
gcgaagtttggtcagtcacccccacaagcagattttcttgatctactgtctcgtgcgcag
catgaacaaattcaatcattggaacatcagatgcaagccaggcagttaccaacggggatg
agacagaggatggaagacgacagacatggtggttctgtctggccagcagatgaatcaaat
cagtttttgaggacccatgctggtgctcagcgagctcactcttccggatttagtccttta
gaattttatcagaagcaacagaggccatcccatgaggagcagcttagccaacttgaccgt
aatctttcattgcaggatcgacttcagcaagggttttatgagcctggctctcatccgttt
gagcggtctatgtcactgcctgctggggcacaagggatgaacttggatgctgtaaatgcc
atggctcgtgctcagggcttggatatgcaggattcccttggacggatgccatcgggtggt
caattgggaacattttcatctggaatccattctcataatcctcatcaccctcttcctaac
caatttcatgcttcacatttggatgcaattgagggtcactggcctgagaagaatgaacag
ctagaaaatgattggatggactctcggtttcagcagttgcatattaatgctgagcggcag
aaaagggagtcagagatcaatattccttctcaggatcgaggtttatggatgtcagatgga
ttgaatgaagagcattcaaagagactattgatggagttactccataaaaaatcagcccat
caacctgctgagtcattgaatgtcaacaatggcatcttctctgataaaaggccttcatct
ggcatgtactctggttcaagctcttcaagtcacccattcagtcttcattcagaccaagaa
gcaggtctaaataattcatttcgagtaggatcatatggttcaaatcatatggagctccca
caggaagagcgggccagcagcatggaaagcaatgaaaagttggtgtatagatctgattct
ggagcattggttgagagagagtcattcttggctggcatcaatgctacgagtcagccgatt
tacacaaattctaacatcattagtaagtcttctatcagtaaagaggtttcggagttggag
ggaaggaagcgtgggacgaagagtgaggggatcattaggggacaagcgtttgacactcga
gaacaaatggttgaacaagcagtgttggctgctccagattatgaggagaggtcagcaaat
tcccttaacatgcgttcgtcatctggtgtttcaggctttcatagcgacaagattggccga
agtaattcatttgcggaagaaacaaccagggatcgggttccagccccatccaaaactcaa
gataatattctgctgagacgacctcctgtctcaagcgcttcagcatcccacgaaggattg
tcagaactgatctctaatccagtcttccgaggacaaagtgcaagtgctgctccagatggg
gggaggcaagaccccgttgttgttcatccagtaaaccaaggttctgatgccttgccgtca
tcttcaaagaaagaaattcaatttcgccgtacttcttccaccagcgatgctgatgtgtca
gaggcctcatttatggatatgcttaagagtaataccaagaagctggctccgacggatgcc
catgcgacggcgggagaagatgcaatgcaagggaaccggagtggcaaaaagaagggaaag
aaagggaggcaaatcgatcctgccctcctcggttttaaagttaccagcaaccggataatg
atgggcgaaatccatcgcatagatgattag
DBGET
integrated database retrieval system
