Malus domestica (apple): 103403419
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Entry
103403419 CDS
T03194
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X3
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103403419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103403419
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
103403419
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103403419
Prokaryotic type
103403419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
103403419
NCBI-ProteinID:
XP_008340473
LinkDB
All DBs
Position
16:complement(join(460761..460827,461157..461240,461750..461885,462099..462129,462374..462747,462836..463250))
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AA seq
368 aa
AA seq
DB search
MSSIIFPGVCNLPANSKSTIRALAPIHKAYHSRRLSTSGIPSEKERKMGSTSKTAAKKNK
TLFDLFPPATAPSAKRFKSDSTASAGHSLSSTTNNDSSAASTDLTAQQKSRIEFQKLLAK
ARRNLSTCSNRVSHSKSKVGEGVKLEELLVEETWLEALPSELQKPYAKTLSKFVESELCG
GVPIYPPTHLIFNALNSTSFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIF
KELNKDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRNHQANSHAKKGWEQFTDAVIKTISQ
KRDGVVFLLWGNSAQQKIRLIDESKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLEEMG
IPPIDWQL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgatcattttccccggcgtctgtaatcttcccgccaattcaaaaagcacaata
cgagcgttggcgccaatacacaaagcatatcactctcgtcgtctgagcactagcggcatt
ccgtcggaaaaggagagaaaaatgggttcaacatcgaagaccgccgccaagaaaaacaaa
accctattcgatctcttcccacccgccaccgctccctctgccaaacgcttcaaatccgat
tccaccgccagtgccggccactcactctcgtctaccaccaacaatgactcctccgccgcc
tccacagacctcaccgcccagcagaagtcacgcatcgaattccaaaagctgctcgccaaa
gccagacgcaacctctccacctgttccaacagagtctcccattccaagtccaaagtaggc
gaaggagtgaaactggaggagctgttggtggaggagacgtggctggaagcgttgccgtcg
gagcttcagaaaccctacgccaagaccctctccaagttcgttgagagtgagctctgcggg
ggcgttcccatatatccgcccactcacttgatcttcaacgccctcaactccacctctttc
gacagggtcaaggctgtcatcctgggtcaggacccgtatcacggtccgggtcaagccatg
ggtctctctttctctgttcctgagggtgtcaaggtcccctcaagtctggttaatatattc
aaggaactgaacaaagatcttggctgttcaattccatctcatggcaatcttgaaaaatgg
gctgttcagggtgttctcttgctcaatgctgttctcactgttaggaatcatcaggctaac
tctcatgcaaagaagggatgggagcaatttaccgatgctgttatcaaaacaatttcacaa
aagagggacggagttgtttttcttttgtggggaaactctgctcagcagaaaatcaggttg
attgatgagtcaaagcatcacattctcaaagcggcacatccttctggtttgtcagcaaac
aggggcttctttggctgcaggcatttttctcgcacgaaccagcttctggaggagatgggc
attcctcccatagactggcaactttga
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