KEGG   Malus domestica (apple): 103403769
Entry
103403769         CDS       T03194                                 
Name
(RefSeq) cullin-1 isoform X1
  KO
K03347  cullin 1
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
mdm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103403769
   04120 Ubiquitin mediated proteolysis
    103403769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103403769
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     103403769
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DUF3232 RTT107_BRCT_6
Other DBs
NCBI-GeneID: 103403769
NCBI-ProteinID: XP_008340821
LinkDB
Position
16:join(13345548..13345681,13345786..13345885,13346188..13346373,13346642..13346689,13346863..13347066,13347163..13347240,13347387..13347476,13355131..13355211,13355339..13355401,13356035..13356070,13356143..13356229,13356315..13356464,13356572..13356627,13356755..13356875,13356997..13357158,13357263..13357406,13357542..13357760,13357856..13358023,13358134..13358235)
AA seq 742 aa
MNDRKTIDLEQGWEIMQKGITKLKNILEGLPEPQFISDDYMLLYTTIYNMCTQKPPHDYS
QQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWTNHKIMVRWLSRFFHYLDRYF
IARRSLPPLNEVGLTCFRDLVYQDLKAKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE
IGMGQMDHYENDFEEDMLKGTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL
HSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVGDLSRMFRLFSKIPRGLDP
VSQIFKQHVTSEGTALVKQAEDAASNKKAEKKDVVGLQEQVFVRKVIELHDKYIAYVNEC
FQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKV
VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERCILTKLKQQCGGQFTSKMEGMVT
DLTLAKDNQVGFEEYLKNNPQANPGIDLTVTVLTTGFWPSYKSFDLNLPPEMVKCVELFR
EFYQTKTKHRKLTWMYSLGTCNIIGKFEPKTIELIVTTYQASALLLFNTSDRLSYSEIMT
QLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDYFEFNAKFTDKMRRIKIPLPPVD
EKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKRIE
DLITRDYLERDKDNPNLFRYLA
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgaacgaccgtaagaccatcgatttagaacaaggatgggagatcatgcagaaggggatc
acaaagctgaagaacattctagaagggttgcctgagccgcagttcatctctgatgactac
atgttgctctacacaaccatatacaatatgtgcactcaaaagccaccacatgactattca
cagcagctctatgacaagtacagggaatcttttgaagagtacattacttcgacggttttg
ccatctttgagagagaagcatgatgagttcatgttgagagagcttgtgaaaaggtggacc
aaccataaaattatggtcaggtggctctctcgtttctttcattatcttgatcgctacttt
atagctcggagatcacttccacccttaaatgaagttggacttacttgcttccgagatctc
gtctaccaagatttgaaagcaaaagtaagagatgctgtaatatctctgattgatcaagaa
cgtgaaggagagcagattgatcgagctctgttgaagaatgttctggatatatttgttgag
attggaatgggacaaatggatcactatgaaaatgactttgaagaagacatgcttaaaggc
accgctgcctattattctcgaaaagcttccaactggatcttagaagattcttgtccagat
tatatgctaaaagcagaggaatgtttaaaacgggagaaagatagagtttctcactacttg
cactctagtagtgagccaaagctgcttgagaaagttcaacatgagctgttgtctgtttat
gcaacacaattacttgagaaagagcactctggatgccatgcattgcttcgagatgacaag
gtgggtgatctgtctagaatgttcaggctattttctaagatacctcggggcttggatcct
gtttctcaaatattcaagcagcatgttacttctgaaggaacagccttagtcaaacaggca
gaagatgcagcaagcaacaagaaggcagagaaaaaggatgtggttggtttgcaggaacag
gtttttgttagaaaagtgattgagctgcatgataagtacatagcatacgtcaatgaatgt
ttccaaaaccatactcttttccacaaggccctaaaagaggcttttgagatcttttgcaac
aagggtgttgctggaagctctagtgcggaactacttgccactttttgtgataacattctt
aagaagggtgggagtgaaaagttgagcgatgaagccattgaggagacacttgagaaggtg
gtaaagttgctggcttatattagtgacaaggacctgttcgctgagttctataggaaaaag
cttgctcgacgtcttctttttgacaagagtgctaatgatgaccatgagcgatgtattttg
acaaaactgaagcaacaatgtggtggtcagtttacctcaaagatggagggaatggttact
gatttgacattggccaaggacaaccaagtcggctttgaggagtatctgaaaaataatcca
caggcaaatcctgggattgatttgacagttactgtgttgaccactggcttctggccaagc
tacaagtcttttgacctcaacctacccccagagatggttaagtgtgtagaacttttcagg
gaattctatcaaacaaagacaaaacacagaaaacttacatggatgtactcactgggtacc
tgtaacatcattgggaaatttgaaccaaaaaccatagagcttattgtgacgacttatcag
gcttcagccctgctgctattcaatacctcagatagactgagttactcggagattatgact
cagttaaacttgactgatgatgatgttgtcagactactccattccttgtcatgtgccaag
tataagatccttaataaggaaccaaacacaaaaactatctctcctactgattactttgag
ttcaatgctaagtttactgacaaaatgaggaggatcaagattccactcccaccggtggac
gagaagaagaaagtaattgaagatgttgacaaggacagacggtatgccatcgatgcatca
attgtgcgtattatgaagagccgtaaagttttgggtcatcagcagttggttatggagtgt
gtagagcagctaggtcgcatgttcaagcccgacttcaaagcaataaaaaagaggatcgaa
gatctaatcacaagagactacttagagcgggacaaagacaaccctaatttgtttaggtac
ttggcatga

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