KEGG   Malus domestica (apple): 103403781
Entry
103403781         CDS       T03194                                 
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103403781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103403781
   03036 Chromosome and associated proteins [BR:mdm03036]
    103403781
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     103403781
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    103403781
   RSF complex
    103403781
   WICH complex
    103403781
   B-WICH complex
    103403781
   NORC complex
    103403781
   BRF complex
    103403781
   NuRF complex (fruit fly)
    103403781
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII HAND Myb_DNA-binding DEAD HDA2-3 DBINO CHDII_SANT-like AAA_14 ToxN_toxin
Other DBs
NCBI-GeneID: 103403781
NCBI-ProteinID: XP_070671786
LinkDB
Position
16:complement(join(13603569..13603586,13603693..13603794,13604221..13604436,13604530..13604708,13605395..13605560,13605634..13605692,13605779..13605833,13605941..13606010,13606123..13606212,13606295..13606368,13606506..13606537,13606652..13606840,13606927..13607020,13607113..13607200,13607304..13607524,13607663..13607736,13607828..13608110,13608191..13608325,13608551..13608772,13608861..13609040,13609214..13609311,13609427..13609539,13609781..13609887,13609993..13610127,13610839..13611066))
AA seq 1075 aa
MARASKPQVSSDEAPSNGFNSSEEEPINDQEEEEVDEEELEAVARTADSDDDENYPGSDD
DMVADENGDDGLEEEEDDEAILSNAEIGKREKARLRDMQNLKRQKVQEILDAQNAAIEAD
MNNKGKGRLKYLLRQTELFAHFAKGDQSASQKKVKGKGRHASKLTEEEEDEECLKEEEDG
LAGAGTTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLG
YLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERKHIREDLLVAGNF
DVCVTSFEMAIKEKTCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNFRLLITGTPL
QNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV
EKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYL
FQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMLR
GYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWN
PQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKT
VNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAIKFKM
DDTAELYDFDDEKDDKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGAPAKPREP
RIPRMPQLHDFQFFHTQRLNELYEKEVRFLMQTHQKNQLKDTIEVEEPEELGDPLTAEEV
EEKESLLEEGFSTWSRRDFNTFIRACEKYGRNDIKSIAAEMEGKTEEEVERYAKIFKERY
KELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEEC
DRFMLCMVHKLGYGNWDELKAEFRTSPLFRFDWFVKSRTTQELARRCDTIIRLVEKENQE
YDERERQARKEKKLAKSMAPSKRAMGRQPTESPNSGKKRKQLTMDDYVNSGKKRK
NT seq 3228 nt   +upstreamnt  +downstreamnt
atggcgagagcttcgaagccgcaggtgtcgtctgacgaagccccatccaacggctttaat
tcgtcggaggaagagccgattaacgaccaggaggaggaggaggtcgacgaggaggagctc
gaagccgtggctcgcaccgctgactccgacgacgacgagaactaccccggctccgacgat
gacatggtggccgatgagaatggcgatgatggcttggaggaggaagaggacgatgaagct
attttgagtaatgctgaaattgggaaacgggaaaaggctaggcttagagacatgcaaaat
ttgaagagacaaaaggttcaagaaatattggatgcacaaaatgcagccattgaggctgac
atgaataacaaggggaaggggcggttgaagtatcttctgcggcagacagagttatttgcc
cattttgctaaaggtgaccagtctgcatcccagaagaaagtgaagggaaaaggtcgtcat
gcttcaaaattaactgaagaggaagaggatgaagaatgccttaaggaggaagaagatggg
ttggctggggctggaaccacccggctgttgacacaaccttcttgtattcaggggaagatg
agggattaccaactggctggattgaactggctcatacgactctatgaaaatggtataaat
ggaatccttgcagatgaaatggggcttggtaaaacattgcaaaccatctccttattggga
tacctgcatgagtttagaggaataactggccctcatatggtagttgctccaaagtcaact
cttggaaactggatgaatgagattcggcgtttctgccccatcttgcgtgctgtgaaattt
cttggtaatcctgatgaaagaaagcatatacgtgaggaccttctggttgccgggaatttt
gatgtatgtgtcacaagttttgaaatggccatcaaagagaagacttgcttacgccgtttt
agttggcgttatattataattgatgaagcccatcgtattaagaatgagaattcactgctt
tcaaaaaccatgaggctgtataataccaacttccgcctcctaattacgggtacaccactt
cagaataatcttcacgaactatggtctctgcttaactttcttctgccagagatatttagt
tctgctgaaacttttgatgaatggtttcaaatatctggtgagaacgaccagcaggaggtt
gtacaacagcttcacaaggtcctccggccatttcttcttcgaaggttgaagtcagatgtt
gagaaaggtttgcctccaaaaaaagaaacaattctcaaagtaggcatgtcacaaatgcag
aaacagtactacagggctttactacaaaaagatcttgaagttgttaacgctggtggagaa
cgtaaacgccttctgaacatagcaatgcagcttcgtaaatgctgtaatcatccttatctt
tttcaaggtgctgagcctgggcctccatatacgaccggagaccatcttatcacaaatgct
ggtaaaatggttcttttggataagttgcttccaaagttaaaagagcgtgattctagggtc
ctaatattttcacagatgactaggctgctagatatccttgaagattatttaatgttgcgg
gggtacctgtattgtcgcattgatggcaatactggcggagaagatcgtgatgcttccatt
gatgccttcaacaagcctggaagtgagaaatttgtgtttttgctatcgaccagagctgga
ggacttggtattaatcttgccactgcagatgttgtcatcctttatgacagtgattggaac
cctcaagttgatttgcaagcacaagatcgtgctcacaggattggtcagaagaaagaagtt
caagtgttccggttctgcactgagtatactattgaggaaaaagttattgagagggcttat
aaaaagcttgctcttgatgctttggtgattcaacaagggcgattagcggagcaaaaaact
gttaataaagatgaattacttcaaatggtgaggtttggtgctgaaatggtcttcagttcc
aaggatagcacaattacagatgaggacattgataggattattgctaaaggagaagagaca
actgctgagcttgatgcaaagatgaagaaatttactgaagatgctatcaaatttaagatg
gatgatactgctgaattgtatgactttgatgatgaaaaggatgacaagcttgatttcaag
aaaattgttagtgataactggattgaaccaccaaaaagagagcggaagcgcaattactca
gagtctgaatactttaagcaaacaatgcgccaaggtgctccagcaaaaccaagagagcct
cgaattccacgcatgcctcaattacatgatttccaatttttccacacacaaaggttgaat
gagctgtatgaaaaggaagtacgtttcctcatgcaaactcatcagaagaatcagttgaaa
gatacaatagaggtggaggaaccagaagaacttggagatcctttgactgctgaggaggtg
gaagaaaaggaaagcctgttagaagagggtttctctacttggagtagaagagattttaat
accttcattagggcctgtgagaagtatggccgtaatgacataaaaagcattgctgccgag
atggaagggaaaacagaggaggaagttgaaagatacgcaaagatttttaaagaaagatac
aaggagttaaatgattatgataggatcattaagaacattgaaagaggtgaggctagaatt
tcccgcaaagatgagatcatgaaagccattgggaagaagttggatcgttacaagaatcca
tggctggaattgaagatccagtatggtcagaacaaggggaagttgtacaatgaagaatgc
gatcgtttcatgttatgcatggttcacaaacttgggtatgggaattgggacgagttgaag
gcagaattccgcacatcacccttgtttcgttttgattggtttgtgaagtctcgcacaact
caggaactcgctaggaggtgtgatacaataattaggctggtggagaaagagaaccaagaa
tacgacgagagggagaggcaggcccgcaaagagaagaagcttgctaagagcatggcgcca
tcgaagcgggccatgggcaggcagccgactgagagcccaaattccggaaagaagaggaag
caactaaccatggatgattatgtcaactcgggaaaaaagaggaaatga

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