KEGG   Malus domestica (apple): 103404038
Entry
103404038         CDS       T03194                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103404038
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103404038
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_4 zf-C3HC4_3 UBA_RAD5A zf-RING_UBOX ResIII zf-C3HC4_2 DEAD zf-RING_2 RING_XB3-XBAT31 Prok-RING_4 zf-RING_5 AAA_34 zf-RING_4 HDA2-3 zf-ANAPC11 SWI2_SNF2 CUE
Other DBs
NCBI-GeneID: 103404038
NCBI-ProteinID: XP_008341115
LinkDB
Position
16:complement(join(19415923..19416045,19416254..19416352,19416448..19416519,19416616..19417219,19417325..19417437,19417557..19417656,19417807..19417929,19418033..19418100,19418317..19418469,19418589..19418732,19418898..19419092,19419265..19419349,19419492..19419643,19419781..19419933,19420409..19420462,19420586..19420721,19420815..19420948,19421067..19422008))
AA seq 1149 aa
MSIMEDLDARHAEEQDNSEIPMGIPVGIPMGVMVKRTNPGAGARISTMLKEEVSEETDET
ERLRGSKAQFSVKEEVPDSRESLTLVKQEPSDVPDSQELVPIRVKAEPIEESEEAESLSL
VPSQVPESQEGLVLNVEPITTLVMLEASEESGEAEKLHIAKHESPLKKEERQIRKEENVK
KIRSVLGLGPEIRELDILLVLARCGDNPEAAINYILENSISSRKGPEPKSQVKKEVPDCQ
VISVQQMRPENLEDADFPVEQDWLMVGRTFITALSTSKGRKLVDNEIVHFTFPCANSSYK
TQWIVRFSTKRFGEIGRLPMEWAKTVIPLVSSGKVKVRGRCIAAPSVLSMMQEVVLYVSF
YIHHSIFTEGDHSSWRLDVSPVINTSLYPLLTLFKLLKIRPYQKAEFTPEDLDSRKRLLN
IERIEDGAAPVLPLVKRRKGTTQQPSEESKDEQVVTESSLNKLVGAADVYDLEEMEPSST
LTCVLKPYQKQALYWMSELEKGIDVEKAAQTLHPCWAAYHICDERVSSVYVNIFTGEATT
KLPTATLMARGGILADAMGLGKTVMTIALILARPVRKSSESTEITKRRRIDTDTSTPLKP
RGGTLVVCPMSLLSQWKDELETHSESGSISIFVHYGGCRTTDPKTISAQDVVLTTYGVLA
ASYKSDKENSIFHQVDWYRVVLDEAHTIKASKTQAAQAAFALSSHCRWCLTGTPIQNNLE
DLYSLLCFLHVEPWCNWSWWSKLIQKPYENGDPRGLRLIKAILRSLMLRRTKETTDKKGR
PILVLPPVDIQTIKCEQSDAERYFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLR
QCCNHPYLVMSSADSQKIKSRNDPHKFADFENLARKFLEASHDSSSSKQIVPTQAYVEEV
VESIRRGESKECPICLEFADDPVLTPCAHKMCRECLLSSWQTPATGRCPICRQWLANSDL
ITCPSESRFRVTDEENWTESSKVAKLLDFLERILRSGSGAKSIVFSQWTTFLDLLESPMK
KRGIGFLRFDGKLSQTQRERVLNEFNDTRGKMVLLTSLKTGGVGLNLTAASNVFIMDPWW
NPAVEEQAIMRIHRIGQKQTVVVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSAR
IEELKMLFT
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgtctattatggaagacttggacgccagacatgcagaggagcaagacaactccgaaatt
ccgatgggaattccggttggaattccgatgggggtgatggtgaagcggacgaatccaggc
gcgggggctcgtatctcgaccatgcttaaggaagaggtgtccgaggagacggatgagacc
gaaaggcttcgcgggtcgaaggctcaattctcggttaaggaagaagttcctgatagtcga
gagagtttgactctggtcaagcaggagccctctgatgttcctgatagccaggaacttgtt
ccgattcgggtcaaggcagagcccattgaggagtcggaggaggcggagtctctgagctta
gtgccgagtcaggttcctgagagtcaagagggtttggtcctaaatgtggaacccattaca
accctggtcatgctggaggcctctgaggagtcaggtgaagctgaaaagcttcacatagct
aagcatgagagcccgttgaagaaggaagagaggcagattcgaaaggaagagaatgtaaag
aaaattcgctcagttttggggctggggcctgagatacgcgaacttgatattctcctagtg
ctcgctagatgcggtgacaacccagaagccgccatcaattacattctcgaaaactcgatc
tcttcgcgcaaggggccggagcctaagagccaggtgaagaaggaagttcctgattgtcaa
gtgatttcggtgcaacagatgagacccgagaatttggaagatgcagatttccctgtggag
caggattggcttatggtgggaaggacgtttatcactgcactttcaacttcgaaaggcagg
aaattggttgataatgagattgttcattttacttttccttgtgcaaactcaagctacaaa
acccaatggattgttcgattctcgaccaaacgatttggagagattggtcggcttcccatg
gaatgggcgaagactgttattccgcttgtaagttctggtaaggttaaagttcgtgggcgt
tgtatagctgcaccgagtgtcctttctatgatgcaagaggttgtattgtatgtaagtttt
tatattcaccattccatttttacggagggtgaccactcgtcatggaggctagatgtttcc
cctgtcattaatacttcattgtatcctctcctcactttgttcaaattgctgaaaattcgg
ccgtatcaaaaggctgaattcaccccagaagatcttgattcccgaaaacgtctattgaac
attgaacgtattgaagatggtgctgcaccagtgttgcccttagtgaaacgaagaaagggc
accacccaacagccttcagaagaaagcaaagatgaacaagttgttacagaatcatctcta
aataaacttgttggtgcagcagatgtatatgacttggaggagatggaaccgtcaagtact
ctcacatgcgttctgaagccataccagaagcaagctctctactggatgtctgagttagag
aagggaattgatgttgagaaggcagcacaaacccttcatccttgctgggcagcctatcat
atttgtgatgagagggtttcttcagtctatgtgaacatattcacaggggaggcaaccaca
aaacttccaactgcaacgctaatggcaagaggaggaatcctagcagatgcaatgggactt
gggaagactgtgatgacaattgctctaatacttgcaagaccagtccgaaaaagctctgaa
agtactgagattacaaaaaggaggaggatagatacagatacaagcacccccttgaaacca
agggggggcactcttgttgtctgtcccatgtctttgttaagccagtggaaggatgagctc
gaaacccattcagagtctggaagtatttctatttttgtccactatggtgggtgcagaacc
actgaccccaaaacaatctcggcacaagatgttgtcttgacaacgtatggtgtgttggct
gcatcttataaaagtgataaggagaacagtattttccatcaggttgactggtatagggtg
gtgcttgatgaagcacataccattaaggcttcaaaaacccaagcagctcaggctgctttt
gccttgtcctcgcattgtcgatggtgcttgacaggaacccctattcagaacaatttggaa
gacctctacagcctcttatgcttcttgcatgtcgaaccgtggtgtaactggtcatggtgg
agtaaattaattcaaaaaccatatgagaatggtgatccaagaggactgagattgatcaag
gctattttgaggtcactaatgctaagaagaacaaaggagacaacagataaaaaaggaagg
cccatacttgttctccctccagtcgacattcaaaccatcaagtgtgaacagtcggatgct
gaacgctacttctacgatgccctttttaagagatcaaaagtccagtttgatcaatttgta
gcgcaaggcaaggttcttcacaactatgcaaatatccttgagctgctacttcgattgagg
cagtgttgcaatcacccgtatcttgttatgagtagcgctgattcacaaaagataaaaagt
cggaatgatccacacaagtttgcggactttgaaaatcttgccagaaaattccttgaagct
agtcatgattcttccagttcaaagcagattgtccccactcaagcctacgttgaagaggtt
gtggagagtatccgtcgtggtgaaagcaaagagtgtcccatatgcttggaatttgcagat
gatcctgtacttacaccatgcgcacacaagatgtgcagagagtgtcttctctcaagctgg
cagacaccagctactggtcgatgcccaatatgtcggcaatggcttgcaaacagtgacctt
attacctgcccatcagaaagccgtttccgggtgaccgatgaggaaaactggacagaatct
tccaaggttgcaaagctattggatttcttggagcgtattcttcggtcaggttctggtgca
aagagcattgtgttcagtcagtggactacttttttggatctcttggagtcccctatgaag
aaaagaggaattggatttctgaggtttgatggaaagctgtctcagacacagagggagagg
gttttaaatgagttcaacgacaccagggggaaaatggtgttgctgacatccttgaaaacg
ggtggtgttggtctaaatttaactgcagcatctaatgtctttataatggatccgtggtgg
aatcctgctgtagaggagcaagcgataatgagaattcatcgcattggccaaaagcaaact
gttgtagtcagaagatttattgtcaaggacaccgtggaggagcgaatgcaacaagttcag
gcgaggaagcagagaatgattgccggagctctcactgacgaggaagttcgttctgccaga
attgaggagctcaaaatgcttttcacctaa

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