Malus domestica (apple): 103404188
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Entry
103404188 CDS
T03194
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103404188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103404188
03036 Chromosome and associated proteins [BR:
mdm03036
]
103404188
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103404188
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103404188
PBAF complex
103404188
GBAF(ncBAF) complex
103404188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103404188
NCBI-ProteinID:
XP_008341298
LinkDB
All DBs
Position
14:complement(join(24484320..24484389,24485133..24486688))
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AA seq
541 aa
AA seq
DB search
MNNNNQPRNVGVPPHFGNSGAVSQPMTMNHQPHLLTQSQPPTQGGAHFPGHFQLSEPQAQ
ALAQAQYVNAHAQAQTQAAHAQFVQLQAQAQSLAQLHNANTSNVGGSSPSVATPSTGTAK
RANQKPPSRPPGSSSANTGSPFKTMELTPAARRKKQKLPDKQIPDKVAALLPESGLYTQL
LEFESRVDAAVARKKMDIQESLKCPPRVQRTLRVYVFNTFANQTQTNPEKTNAEPPSWSL
KIIGRLLEDGRDPVVAGLTPKSRAKFSSLFKKVTIYLDQTLYPDNHVILWESSRSPALHD
GFEVKRKGDKEFTAIVRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIAAIWHYVKARKL
QNPNDPTFFVCDPPLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHKIKLSGNCPAGTT
CYDILVDVPMVLEKEMSAFLGSTERSKEIDACDELICASIKKIHEHRRRRAFFLGFSQSP
AEFINTLIASQSKDLKLVAGDASRNAEKERRSDFYNQPWAEDAVIRYLNRKSAGSDAPGS
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatcagcccaggaatgtgggggtgccaccccactttggcaattctggg
gcggtgtcgcaacctatgaccatgaatcaccagcctcatcttctcactcaatcgcagcct
ccgacacaagggggagctcattttccagggcactttcagttgtctgagccgcaagcgcag
gcacttgcacaggcacagtatgtgaatgctcacgcacaagcccaaactcaagctgcccat
gcccaatttgttcagttgcaagctcaagctcagtctcttgcccagctgcataatgcgaat
acaagtaatgttggtggttcatcaccctccgtggcaacacctagcacaggaactgctaag
cgggcgaaccagaagccaccttctcggcctcctggttcatctagtgccaacacgggttca
ccatttaaaactatggagctcaccccagctgctcgtagaaagaagcaaaagctacctgat
aaacaaataccggacaaagtggctgcacttctaccagagtccggtctttatactcagttg
cttgaatttgagtctcgtgttgatgctgctgtggcaaggaagaagatggacatccaagag
tcccttaaatgtcctccccgtgttcagagaacacttagagtttatgtattcaacaccttt
gcgaatcagacacaaacaaatcctgagaagacaaatgcggaacccccttcatggtcactt
aagataattgggaggttactggaagacggcagggatcctgtggtggctggattgacaccg
aaatcaagggcaaaattttcatccctgttcaagaaagttaccatatacttggaccaaacc
ctctatccagataaccacgtgattttatgggaaagttcccgttcacccgctcttcatgac
ggctttgaggtgaaaagaaaaggggataaggagtttactgcaatagtaagactagagatg
aattatgtacctgagaaattcaaactttcaccagctctccatgaagttctgggaattgag
gtagagacccgacccagaattatagctgctatttggcactatgtcaaggccaggaagttg
cagaacccgaatgaccctactttctttgtgtgtgatccacctcttcagaagatttttggg
gaagagaagatgaagttttcgatggtttcacaaaagatatcacagcatttaactccacca
cagcctatacacatagagcataagataaaactttcaggaaattgcccagctggaactacc
tgctatgatatactggttgatgtacccatggtattagagaaagagatgtctgcattcttg
ggaagcaccgagaggagcaaagagattgatgcttgtgatgaattgatttgtgcatccata
aaaaaaatccatgaacatcgacggcggcgagctttctttcttgggttcagtcaatctcct
gcagagtttattaatactttgattgcttctcagagcaaggatctcaagcttgttgctgga
gatgctagtcgtaatgcggaaaaggagcgccgctccgatttctacaatcaaccttgggct
gaggatgctgttattcgttacttgaaccgaaagtcagccggaagtgatgctcccggaagc
acttga
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