Malus domestica (apple): 103404218
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Entry
103404218 CDS
T03194
Name
(RefSeq) sister chromatid cohesion 1 protein 2
KO
K06670
cohesin complex subunit SCC1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103404218
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103404218
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103404218
NCBI-ProteinID:
XP_008341330
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All DBs
Position
17:1252932..1257986
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AA seq
731 aa
AA seq
DB search
MFYSQCLLSRKGPLGAIWVAAYSFKKLKKSQVNQTDISSSVDKILQDEWDAVAYRVLAYL
LLGVVRIYSKKVEYLYDDCNEVLVKINKFVVSTKKNAGPDKLRAPYYTVTLPDRFELDAF
DLGILEFEDVSGGNVVSHEDITLKDSAYGRGQFYSGMYDYEEFDACDTPVKDVLSSHWLD
FDMELRASSSGAKSAPVMEEFHENRLSQEECVDLERFCGVEDEPPRQVKSSGEGKETNGE
QLKVPDIALLGDAIREEANLAEKLEDHRLSHEGLNLETFDGTEREPSHHVRTSSEDHQID
REEVMEPELVQPESQTCPSIVQDHNLITVEAGMEKLQSCTVSQEDYMDIDTFNGVKQPRE
LVCPFGEANHNDGEPKKLPEMISPDSKERQIIMQEDPDPLSVSCDGTPGVKIPDAGVTVP
KFMVVHTPASKEFARFSKKRKCVMDDMTVLPNEIIRKSINDASDLVSKRKKVPQTALAVW
KASRIANLCCDFSEPLIPAAVSRELISLVCKKKLKITVPAKPVAPPEKLDAPESPSVVRS
EQIEIAPETPILRSQAMKSFGSPKSPDAADMDIVTPETSGRVEKEEPPLDSEQAAPSGYA
EEVPFMDRDQEHDFNLLNEDIDSYEGVNPQLEGLSARTRIVARYLHRHFPNCKNRGEEEV
NLLEVSDGRTKKESARLFYELLVLKTQGYVNVKQDDAYGDILISKRQKWDQTWGDDDMDN
RGTSETMYLCA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcagtgcttgctgtcgagaaaagggccgttgggcgccatttgggttgcc
gcctactctttcaaaaagctcaagaagtcgcaggtcaaccagaccgacatctcctcctcc
gtcgataaaattttgcaggatgaatgggatgctgttgcttacagggtgctggcctacctt
cttcttggcgttgttcgaatatactcaaagaaagttgaatatctgtatgatgactgcaat
gaagtgctggttaaaatcaacaaatttgtagtcagtacaaaaaagaatgcaggcccagat
aagctgcgtgcaccttattacactgttaccctacctgataggtttgaactcgatgctttc
gatctggggatccttgaatttgaagatgtcagtggaggcaatgtggtgtctcatgaagat
atcacacttaaagatagtgcatatggaagaggacaattttattcaggaatgtatgattat
gaggaatttgatgcctgcgacaccccagtcaaagatgtactttcatctcactggttggac
tttgacatggagctacgagcatcgagtagtggagccaagtcagcaccagttatggaggag
tttcatgagaataggctctctcaagaagaatgcgttgacctagaaagattttgtggagtt
gaggatgaacctccaagacaagttaaatcatctggtgaaggtaaagaaactaatggagag
cagttaaaggttccagatatagcacttcttggagatgctattcgagaagaagcaaacctg
gcagaaaaacttgaagaccataggttgtctcatgaaggtttgaaccttgagacattcgat
gggactgagagagaaccttcccaccatgttagaacatccagtgaagatcatcagattgat
cgtgaggaggttatggaaccagagttggtacaaccagaaagtcagacatgtccgagtata
gtacaagaccataatctaatcactgtagaagctggcatggaaaagttgcagagttgtaca
gtatctcaagaagactacatggacattgatacatttaatggggtgaagcaacctagagaa
cttgtttgtccatttggtgaagcaaatcataatgatggagagccaaaaaaactacccgag
atgatttcaccagatagtaaagaacgtcaaattattatgcaagaagatccagatcctctc
tctgtttcatgtgatggaactcctggtgtcaaaatccccgatgcaggtgttactgtacca
aagtttatggttgttcatacaccagcctctaaggagttcgctcgattttctaagaaaaga
aaatgtgtcatggatgatatgacagtcctgcctaatgagataatcaggaaaagcataaat
gatgcaagtgacttggtttctaaaagaaaaaaagttcctcaaactgcccttgctgtctgg
aaagccagtcgaattgcaaatctttgctgtgatttctcagagccattgatacctgctgct
gtttcacgagaacttatatccctcgtctgcaaaaagaaattaaagattacagtacctgcc
aaaccagttgcccctccagaaaagttagacgctcccgaatctccaagtgttgttaggtca
gagcaaatagaaattgcaccagaaacccccattcttcgctcacaagcaatgaaatcattt
gggagtccaaagagccctgatgctgctgatatggatatcgtaacacctgagacatctgga
agggtagagaaggaggagccaccccttgacagtgagcaagctgcaccatctggatatgca
gaagaagtaccatttatggacagggatcaggaacatgatttcaatttgttgaatgaggac
attgattcgtacgaaggagttaacccacaactggagggattgtcagcgagaacaagaatt
gtcgcaaggtacttgcatagacactttccaaactgtaaaaatcgaggagaggaggaagtg
aacttgttggaggtttcggatggaagaactaagaaagaaagtgcaaggctgttttatgag
ctactggtgttgaaaactcaagggtatgtgaatgtgaagcaagatgatgcctatggtgat
atactgatctcaaaacgtcagaaatgggaccaaacgtggggagacgacgatatggacaac
agaggcacctcggaaactatgtacttgtgtgcgtag
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