KEGG   Malus domestica (apple): 103404304
Entry
103404304         CDS       T03194                                 
Name
(RefSeq) protein RST1-like
  KO
K27498  focadhesin
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103404304
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103404304
SSDB
Motif
Pfam: DUF3730 TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 103404304
NCBI-ProteinID: XP_008341423
LinkDB
Position
17:join(2209023..2209526,2209790..2210071,2210158..2210241,2210367..2210643,2210967..2211214,2211470..2211647,2211747..2211934,2212056..2212156,2212241..2212316,2212397..2212528,2212613..2212694,2213032..2213104,2213499..2213667,2213856..2213986,2214086..2214177,2214526..2214617,2214703..2214918,2215017..2215094,2215197..2215379,2215575..2216471,2216567..2216863,2217009..2217659,2217971..2218121,2218281..2218399,2218623..2218988)
AA seq 1888 aa
MGLMGIQMNTTSFQLSASLPETVTCAASPSPSASLSMDPYTPLLEKTRVPQPSLQKYAVI
SIFSKLRSAPKYLDSDSEPGREAISQCLHSTSPAVVDQSVRELCSLVADSKIDISRGFLE
LQSALEGSAPKFVDLFVKGLGFLVRFGFQRSNGKWSFSSAAETHPFVKILSCRSDAESEL
VQQVLLFMAKNKQLGMVAICDFLRPFLNYSILRIPFSETSALFARHLISSTASLCCSIPL
DALPVLKMLTDCLVYVPLGNSEDFRNFIYFAECMVDAYTVVLRNLAGTGLLIAEAHDCGL
ELFDKILLISSAGHMHSGLIEPVVEMSKHLVITQKDIGLPYVPKVSSAMLTLFIILVQSE
LEHDQLSTLKLLHLLLKWKYGDEYVHRTASPLSEELLFIFPVISLLSSTSKYVKGVATDV
LVLLQKLLVTVLIAPKHKPAIEAGYPSLSTPGYIVFRILQRLWFQDPSLSSFFLNFASSG
RTDGKEIHDVSRSWPSQLREYTLWIVDRRKSSLPLSQSQERFITGMPLLLCAIAGVLVMH
EVLGSTALDSFAAIATMDPKVGAQLLLAILFYNNIFTRKDISRCGMLPKLLTTLPAPASH
SMMIPVVVQTILPMLQKDAKPTLYATAIRLLCQTWETNDRAFGSLQGVLLPKLLTELKSE
RDICISMAASIRDVCRKNPDRGVDLILSVSACIENKDPIIQALGFQSLAHLCEADVIDFY
TAWDVITKHVLDYRADSVLAHSVGLLLRWGSMDAEAHPEVSKNVLQILWSVSLSAHPGLE
SQWEKARVSSLEALAQYEISYIEQNIQDFKNMSTELLFSEANITVLRALEELQVKVITYE
HLTRRRLVKEKRVLGSKIEKLLDVFPQVIFSSGKKSNARELPGAALLCLSFTPKDVNTVR
TSRGFRDTHAGYEKALVELASSIQLSRNIFVALISLQSWKSFVRRWLGADILSFDNQISS
VVLDKTAKAASDILKSMIKAAEEAIPRSAENIALAVGALCAVLPPSAHTIKSAASKFLLK
WLVQPEHEHRRWTAAISLGLISSCLHVTDHKQKFENITGLVEVMCRSSSTLVRGACGVAL
GFSCQDLLTRVDAAGKSDMEKETGKMSETDLLGMIVKALSLVIGQLTQFPSDVLESLSAY
FPPSTFGIDVNTTSELSHENSDDFLEDIWGVAGLVLGLASTVGTMYRTGAHDAVLKIKGL
IVSWIPHMTTLVQGSGSCSRGSEIVLSVGSCLALPIIVEFCQRVELMDDNEVHLLVNGYK
ELISELVSVKKYGTFYQSLLMSSCVGAGNLLACTLNGGLHFIEVEHVKGLLELFRKCYSN
PYPPLVHLGGMLGLVNALGAGAGILFDMQPPTSVQTAYDHKESCYLMGPLLSSPTCEQYL
TSLMQDLFLVAQNSDDRQLQHYAAWAVSFLRNHLFTKEVVNVDNSSNTDAGGSKSISQSF
ADDSSVLKLSSWLMHLTSSGTGNAPHVCTVVTVIRCLSQAPRLPTLDWGAIIRRCMRYEA
QVAKLFPTDVSLEKGSLREECVKFSLVHANKFDPLLSFLDELSDLSRFRTLELKLQSCIL
GHLVDLVKVFSGSRLEKMFDDVCSYFSSFTSYQSYDTNETSLLRISCWKGIYQCLDEASL
DSLEYISHIENCLEVLFSLMHVTQLAATAGEHFVEEWSEAVRCFGKARKSWLLNFLQVTQ
EDLQQKDGQLIQVLKKLQTKAKLVSVGSIPLTELGRLKSLILNTQSNGIWDVLIEVVAAL
QHADGSVKRQWLVDAVEISCVSTYPSTALQFLGLLSGSWSKYMPLLILDQHAVLSDLPVT
LSSLLSDSSWGGVVEFIVPSLLASTERIYNWTTHIKRGEDVPPDMQPIDKSESSTAVFLL
RVMHSTCVSLKHYLPLEKQLQLANMAVA
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgggccttatgggcattcagatgaacacgacgtcgtttcaactgagcgcttccctccct
gaaacggtaacttgcgctgcgtctccgtctccctctgcatctctctcaatggacccttac
actccactgctggagaaaacgcgggttccccaaccgtcgctccagaaatacgccgtgatc
tcaatcttctcgaagctccgatccgccccgaagtacttagactccgactccgaacccgga
agagaagccatttctcaatgcctccactccacctcccccgccgtcgtcgaccaatcggtt
cgcgagctatgcagcctcgtagcggactccaaaattgatatctcccgcgggtttctggag
ctccagtccgcactcgaagggtccgccccgaaatttgtcgaccttttcgtcaaaggtttg
ggctttttggttcggtttgggtttcagaggagcaatggcaagtggtcgtttagttccgcc
gcggagactcatccgtttgttaagattctgtcatgccgatcggatgctgagtcggaactt
gtgcagcaggttttgctgtttatggcaaagaataagcagttgggaatggtggcaatatgt
gacttcttaagaccgtttttgaattattcgattttaaggatacctttctcagagacttcg
gccttgtttgcaaggcatctaatatcgtcgacggcctctctttgttgctcaattcctctt
gatgcactgcccgtcttgaaaatgttgacagactgtctcgtatatgttccactcggtaat
tcagaagattttaggaatttcatatattttgcggaatgtatggtcgatgcatatacagtg
gttctgaggaatttggctggaactggattgctgatcgctgaggctcatgattgtggtttg
gaactgtttgataaaattcttttaatttcttcagctggccacatgcactctggtttgatt
gagcccgtagttgaaatgtccaagcacttagtgattacccagaaagatattgggttgcct
tatgtgcctaaagtatcatcagctatgcttacgttatttattatcctcgttcagtcagag
cttgagcatgaccaactatctacattgaaacttctccaccttcttttgaagtggaagtat
ggagatgaatatgttcacagaactgcaagtcctctgagtgaggagcttttattcatattc
cctgtcattagcctactgtcatctacttctaaatatgtcaaaggagtagcaacagatgtg
cttgtcctgttacaaaagctcttagtaacagttttgatagcaccaaagcataaaccagca
attgaagcaggatatccatctctaagcacacctggatatattgtttttagaatcttacag
cgtctatggttccaggatccttcattgtcgagtttcttcttaaattttgcttctagtggt
agaactgatggcaaagagattcatgatgtgtcaagatcttggccatctcaattacgagag
tacactttatggattgttgacagacgaaagtcttctctacctctctcccagtctcaagag
agattcattactggaatgcccttgttactctgtgcaattgctggggttttagtgatgcat
gaggtacttgggagtactgctttagattcatttgctgccattgctactatggatcctaaa
gtaggagctcaactattgctggctatcctattttacaataacatattcactagaaaagat
ataagtcgctgtggtatgttgcccaaacttttgacaacgcttccagcacctgcttcacat
tctatgatgattcctgttgttgttcagactatcttgccaatgcttcagaaagatgctaaa
ccaactttgtatgcgacagccatacgtttactttgccagacttgggagaccaatgaccgt
gcctttgggagtttgcagggagtgttgcttccaaagttgctcactgaattaaagtccgag
agagacatatgcatcagtatggccgcatcaattcgggatgtttgcagaaaaaatcctgat
aggggtgtggatctcatcctgtctgtttcggcttgcattgagaacaaagatcctataatt
caagctcttggttttcaaagtcttgcccacctttgtgaagctgacgtaattgatttttat
acagcctgggacgtcatcacaaagcatgttctggattaccgtgcagattcagttcttgct
catagcgttggccttcttctgaggtggggttcaatggatgctgaagcacatcctgaagtc
tcaaagaatgtcttgcaaatcctgtggagtgttagcttgtctgctcaccctggtctggag
tcacaatgggaaaaggcaagggtctcttccttagaggccttagcacaatatgagatatca
tatattgaacaaaacattcaagatttcaagaacatgagcacagagttacttttctctgaa
gcaaatattactgtactcagggctttggaagaacttcaagtcaaggtcataacttacgag
catcttacaaggcgaagattagtcaaggagaaaagagttttaggaagtaagattgagaag
ctactggatgtgtttccacaggtgatcttttcttcagggaaaaaaagtaacgctagagag
ctacctggtgcagccctgctatgtctttcctttactcctaaagatgtaaacaccgtaagg
acatcaaggggattccgagatacacatgctggatatgagaaggcattggtggaactagct
tcatccattcagctttcaagaaatatttttgttgcccttatttcactccaatcttggaag
tcctttgtgcgacgttggctgggggcggatatcttatcctttgataatcaaatctcctct
gttgtcttggataaaactgctaaagctgctagtgacattctgaagagtatgataaaagcg
gcagaagaggctattcctagatctgctgaaaatattgcactggctgttggtgcactttgt
gcggtcttgcctccatctgctcatactattaaatcagctgcctcaaaatttctgttgaag
tggttggtccagcctgaacatgaacaccgcagatggactgctgcgatttctcttggattg
atctcaagttgcctacatgtaactgatcataagcaaaagtttgagaatatcactggactt
gtcgaggttatgtgtagaagcagtagcacccttgttagaggagcttgtggggttgccttg
gggttttcttgccaagatcttctgaccagggttgatgctgctggtaaatctgacatggaa
aaggaaacaggcaagatgtcggaaacagacttgcttggtatgatagttaaggcattatcc
ctggtgataggtcagctcactcagtttccatctgatgttttggaaagtctgtctgcatat
ttcccacctagcacttttggtatagatgtgaatacaacttctgaactgtcacatgagaac
tctgatgacttcctcgaagatatctggggtgttgctggacttgttcttggtttggcgagt
actgttggtacaatgtacaggactggggcacatgatgctgttcttaagataaagggctta
attgtttcatggattccacatatgactactctggttcaagggtctggatcttgctctcgg
ggttctgagatagtcttatcagtagggtcctgtcttgcacttccaattatagtggagttc
tgtcaaagagtagaactgatggatgataatgaagtacatcttttagtgaatggctataag
gagctcatttctgaattggtctctgtcaaaaaatatgggaccttctatcaaagtttactg
atgtcatcttgcgtaggagccggaaaccttctagcctgtacactgaacggagggttgcac
tttattgaggttgaacatgtaaaaggtctactggaattgttcagaaaatgctattcaaat
ccttatcctcctttagtccatttgggtgggatgcttggacttgttaatgctctaggagca
ggtgctgggatcctgtttgacatgcagcctccaacctcagtgcagacagcttatgaccac
aaggaatcttgctatctcatgggtcctctactttcaagtcctacttgtgagcagtatttg
acatcgttgatgcaggatttgtttcttgttgcacagaattctgatgatcgtcaattgcaa
cattatgctgcatgggcagtttcgtttcttcgaaatcatttgtttaccaaggaagttgtc
aatgttgacaatagtagcaatactgatgcaggtggttcaaaatctatttcccaaagtttt
gcagatgacagttcagttttgaagctttcttcatggctgatgcatctcacttctagcggg
acaggcaatgcccctcatgtttgcacagtagtgactgtgataaggtgcctttcacaagct
cctaggctgccaaccttggattggggtgctatcatcagacgctgcatgagatacgaagct
caggttgctaagttgtttccaacagacgtatctcttgaaaagggatcccttagggaggaa
tgtgtaaagttctcattggttcatgcaaataagtttgatccacttctaagtttccttgat
gagctgtctgacttgtccagattcagaacacttgagttaaagctgcaatcttgtattctt
ggtcatcttgtagatctcgtcaaagtattctcaggttcaaggcttgagaaaatgtttgat
gatgtctgtagctacttctcttcatttacttcatatcaatcatatgacaccaatgagaca
agcttattacggatttcatgctggaagggtatctatcagtgtttagatgaagcttccctt
gactctctagagtacatatctcacatagaaaattgcttggaggtgctcttttccttgatg
catgtgacgcagttagctgccacagcaggagagcatttcgtagaggagtggtctgaagca
gttaggtgctttgggaaggctcgtaaaagttggttgttgaacttcctgcaggttacccag
gaggacttgcagcaaaaagatggacaacttattcaagttctgaaaaagcttcaaaccaaa
gctaagctagttagcgttggctccatcccattgactgagctgggaaggttaaagtctttg
atattgaacactcaatcaaatggtatttgggatgtgctcattgaagttgtagcagctttg
caacatgcagatggaagtgtcaaaagacagtggcttgttgatgcagttgaaatcagctgt
gtatcgacttacccttccacggcgctacagtttcttggattgctatctggtagctggagc
aaatatatgcctcttctgattctggaccaacatgccgtgctgagcgatttaccagtcacc
ctatcctctcttctctcagactctagttggggaggagttgtggaattcatcgttccttct
cttttagcatcgacagaacgcatttacaattggaccacacatatcaagcggggtgaggat
gtcccgcctgacatgcaacccatcgacaaaagtgagagttccacggcagttttcctactg
agagtaatgcatagcacctgtgtatctctgaagcattacctgcctctcgagaagcagctt
cagcttgccaatatggcggttgcttga

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