KEGG   Malus domestica (apple): 103404412
Entry
103404412         CDS       T03194                                 
Name
(RefSeq) FACT complex subunit SSRP1-like
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mdm03000]
    103404412
   03036 Chromosome and associated proteins [BR:mdm03036]
    103404412
Transcription factors [BR:mdm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    103404412
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     103404412
SSDB
Motif
Pfam: PH1_SSRP1-like SSrecog POB3_N Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 Nop14
Other DBs
NCBI-GeneID: 103404412
NCBI-ProteinID: XP_008341538
LinkDB
Position
17:complement(join(3338773..3338894,3338991..3339069,3339168..3339353,3339438..3339536,3339974..3340124,3340210..3340355,3340453..3340650,3340771..3340863,3340947..3341033,3341258..3341366,3341534..3341628,3341728..3341811,3342019..3342155,3342596..3342701,3342997..3343182,3343814..3343867))
AA seq 643 aa
MTDGHLFNNISLGGRGGTNPGQLKIFSGGILWKKQGGGKAVEVDKADIVGVTWMKVPKTN
QLGVQIKDGLYYKFIGFRDQDVTSLTNYFQNTCGLTPAEKQLSVSGRNWGEVDLSGNMLT
FLVDSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDESHPPAQVFRDKISSMADVGSGGEDAVTTFDSIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTYVVVTLDPPIRKGQTLYPHIVLQFETDLVYQTDLAMS
EELLNTKYKDKLELSYKGLMHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHDQIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGEGQAANGGVAPLLDDADDDAVDPHLVRVKNEAGDDESD
EEDEDFVIDKDDGGSPTDDSGEDDSDASESGGEKEKPAKKESRKEPSTSKVPSSKKQKTK
DAGEDGSKKKKQKKKKDPNAPKRAMSGFMFFSNTERENVRRENPGIAFTAVGRALGEKWK
KMSADEKEPYEAKARQDKERYKDEINGYKNPQPMNIDSGNESD
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgacggacggccacctcttcaacaacatctccctcggaggccgcggcggcacgaatcca
gggcagcttaaaatattttcaggaggaattttatggaaaaaacagggaggtggtaaagca
gtcgaggttgataaagctgacattgttggggtaacatggatgaaggtcccaaagactaac
caacttggtgttcagattaaagacgggttatactacaagttcattggatttcgtgaccag
gacgtcactagtttgaccaattattttcaaaatacatgtgggttaacaccggcggagaag
caactttctgtaagcggacgtaattggggagaagtggatttaagtgggaatatgctgact
ttcttggttgactccaagcaagcatttgaggtatctttggctgatgtctcacaaacacaa
cttcagggaaaaaatgatgtcatcttagagttccatgtggatgataccacaggagctaat
gagaaagattcattgatggaaataagctttcatatacctaactccaacactcaatttgtt
ggtgacgagagtcatcctcctgctcaggttttccgtgacaaaatctcgtcgatggcagat
gttggttctggaggtgaagatgctgttaccacatttgatagcattgcaatcctcacacca
aggggtcgctacagcgtggaacttcatctttcattcttgcggctacaaggacaggctaat
gatttcaaaattcagtacagcagtgttgttcggctgtttctacttccgaagtctaaccag
cctcatacctatgttgttgttactcttgatcctcctatccgtaaagggcaaacattgtac
ccacatattgttttgcagtttgaaactgacctcgtgtatcaaaccgacctggcaatgagt
gaagaacttttgaacacgaagtacaaggacaagttagaactatcttataagggactaatg
catgaagtgttcaccacaatactgcgtggcttgtctggtgccaaagttacgaaaccggga
aaattccgcagctgtcaagatggttatgctgtcaaatcttcattgaaagctgaagatggt
gttctatatcctctggagaagagcttcttttttctaccaaaacctcccacccttattctt
catgatcagattgactatgtggaatttgagaggcatggcgctggaggctcaaatatgcac
tattttgaccttctcatccgactcaaaagtgagcaagaacacctgttccgaaacattcag
aggaatgaatatcataatctttttgacttcatcagttcaaagggtctcaaaatcatgaac
ttaggagaaggccaagcagcaaatggtggtgtggctcctcttcttgatgacgcagatgat
gatgctgttgacccgcatcttgtccgtgtgaagaatgaagctggtgatgatgagagtgac
gaagaggatgaagattttgttattgacaaggatgatggaggttctcctactgatgactcc
ggggaggatgattctgatgctagtgaaagcggaggtgaaaaagagaagcctgcgaaaaag
gagtctcgtaaggaaccttcaacttccaaggtaccatcttccaagaaacaaaaaaccaaa
gatgcaggtgaagatggttcaaagaagaaaaaacagaagaagaaaaaggatccaaatgca
ccgaaaagagcgatgtctggtttcatgttcttctcaaatacggagagagagaatgtaagg
agagagaaccctggaattgcgtttaccgctgtggggagagcacttggagagaagtggaaa
aagatgtcggctgatgaaaaggagccatatgaagcaaaggctcgtcaagataaagaacgc
tacaaggatgaaattaacggctacaagaacccccaacccatgaacatagattcggggaac
gaatctgattga

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