KEGG   Malus domestica (apple): 103404435
Entry
103404435         CDS       T03194                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
mdm  Malus domestica (apple)
Pathway
mdm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103404435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103404435
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103404435
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     103404435
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103404435
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B Glyco_hydro_68
Other DBs
NCBI-GeneID: 103404435
NCBI-ProteinID: XP_008341566
LinkDB
Position
17:join(3557543..3557703,3558728..3560768)
AA seq 733 aa
MSGQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTHHLKEISKSIEAAQGELFLEELNRKWAEHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHASKTRSRLLDTLLELVHRERSGEVINRGLMRNI
IKMLMDLGSTVYQDDFEKHFLDVSADFYRCESQEFIESCDCGNYLKKAERRLTEEMERVS
HYLDARSEAKITNVVEKEMIESHINRLVHMESSGLVNMFVDDKYDDLGRMYSLFRRVQNG
LVIVRDVMTAYIRDTGKQLITDPERLRDPVDFVQRLLDLKDKYDKVISLAFNNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEVVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMHGFYS
TVGPLLGDSPMLTVQVLTTGSWPTQPSATCNLPAEILWVCEKFKSYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCVLMLFNNTDRLTYKEIEQAAEIPAIDLKRCLQS
LACVKGKNVLRKEPMSKDIAEEDAFFFNDKFTSKFIKVKIGTVVAQRESEPENLETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQGRFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtggtcagaagaagaggaacttccaaattgaagccttcaaacatcgggtcgtggtt
gatccgaagtacgctgagaagacgtggaagatcctggagcatgcgattcatgaaatttac
aatcacaacgctagcggtctcagcttcgaggagctctacaggaatgcttacaatatggtt
ctgcacaaatttggagagaaactctactccggtttggtgacaaccatgactcatcatcta
aaagaaatatctaagtcaattgaagctgctcagggagagttgtttctggaagagctgaac
cggaaatgggcagagcataacaaagctttgcagatgatccgagacatattgatgtacatg
gataggaccttcatcccaagcacccacaaaacccctgttcatgagcttgggttgaacctg
tggagggatgttgttatccatgctagcaaaacccggtctaggcttttggatacacttctt
gagcttgtgcacagagaaaggagtggggaagtaattaacagaggcttgatgaggaatatt
ataaaaatgttaatggatttaggttctactgtttaccaagatgactttgagaagcatttt
cttgatgtttcagctgatttttaccgctgtgagtctcaagagttcatagagtcatgcgat
tgtgggaactatttaaagaaggctgagagacgcttaacggaagagatggagagagtgtcc
cattatttggatgctagaagtgaagcgaagataactaatgtggtggagaaggagatgatt
gaaagtcacattaacagactagttcatatggagagctcaggtttagttaatatgtttgtg
gatgacaaatatgacgacttgggaagaatgtatagcttgttccgcagggtgcagaatgga
cttgtaatagtacgagatgtcatgactgcttacatccgagatactggtaagcagctaatt
actgacccagaaaggttaagggatcctgtagattttgtgcagcgtctcctggatttgaag
gataaatatgacaaagttatcagcttggcatttaacaatgacaaaacattccaaaatgct
ctaaattcctcttttgaatacttcattaatttgaatgcccggtcccctgaattcatttct
ctgtttgtggatgacaagcttcggaaaggacttagaggggttagtgaggaggatgtagag
gttgtactggacaaggtcatgatgcttttccgttatcttcaagagaaagatgtctttgaa
aagtattacaagcaacacttggcaaagaggcttctttctgggaagactgtttctgatgac
gccgaaagaagtctgattgtgaagctcaaaacagagtgcggatatcagtttacttctaaa
ttggagggtatgtttactgatatgaagacctctcaggatacgatgcatggattctactca
actgtgggacctctgttaggcgatagcccaatgctaactgtccaggtcctcaccacaggt
tcatggcctactcaaccaagtgccacctgcaaccttccagcagaaattttgtgggtatgt
gagaagttcaagagttactatcttgggacccatactggccggagattgtcgtggcaaact
aatatgggcacagctgatttgaaagcgacttttggaaagggccagaagcatgagctgaat
gtttccacatatcagatgtgtgtactgatgctatttaacaacactgaccggttgacgtat
aaggaaattgagcaggccgcagagataccagccattgacttgaagaggtgcctgcaatct
ctggcctgtgttaaggggaagaatgttcttcggaaggagccaatgagcaaggacatagct
gaggaggatgccttcttctttaatgacaagttcacaagcaagttcatcaaggtaaagatc
ggtactgtggttgcgcaaagggagtctgaaccagaaaatctagaaacccgacagagagta
gaggaagacaggaagccccagattgaggcagcaattgtgaggatcatgaagtcaaggcgg
gtcctggatcacaataacattgttgccgaggtgacgaaacagctgcaggggcgattcttg
cccaaccctgttgtaataaagaaacgaatcgagtccctcattgagcgggagtttttggag
agggataaaacagatagaaaattgtacaggtaccttgcttga

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