Malus domestica (apple): 103404458
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Entry
103404458 CDS
T03194
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103404458
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103404458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
103404458
NCBI-ProteinID:
XP_008341592
LinkDB
All DBs
Position
17:complement(join(3819046..3819513,3819739..3819851,3819938..3820019,3820107..3820211,3820321..3820378,3821393..3821488,3821601..3821674,3821760..3821822,3822260..3822469,3822775..3822957))
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AA seq
483 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FSDLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAVTASMARNALDGRSIPRYLL
PENVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPLLPVNPTAIEGIMQPTVGPDGKRKEL
ESNVLLASIENMQYAVTVDVIHTVFSAFGTVQKIAIFEKNGQTQALVQYPDLNTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAQQVSGYPPPGAWQ
NPQAAPMYHGNEYSGAASVQAQAPPGPPGQSPSWDPAMQAGISTFGSAPSTFPGQPYQAS
SGPVYASAAMPVGSSPLQSGPTSSGMGSWGMSQPGVPPNVRPGGGASSPGVRPPGASPSY
YGQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggggacgccgcagttccggtacacgcagacgccgtcgaaggtgctccac
ctccgtaacctcccgtgggagtgcgccgaggaggagctgatcgagctctgcaaacctttc
ggcaagatcgtcaacaccaagtgtaatgtcggcgccaatcgcaatcaggccttcgtcgaa
ttctcggacctaaaccaggccatcaatatggtttcgtattatgcttcatcctcggagcct
gcgcaggtccgtggtaaaaccgtgtacattcagtattcaaatagacacgaaattgttaac
aacaaaagtccgggagatgtgcccggaaatgtcttgttggtaaccattgagggtgttgaa
gctggcgatgtgagcattgatgttattcacttggtgttctctgctttcggctttgtgcac
aagattgctacttttgaaaaagcagcaggcttccaggcattgattcagttcagtgatgct
gtcaccgcatctatggcaaggaatgcattggatggaagaagtatacccaggtacttgctt
ccagagaacgtcggttcatgcaacttacgtatttcatattccgcacacaccgatctgaac
atcaagttccagtctcaccgaagcagggactatacaaatccgctccttcctgtaaatcct
actgcaatagagggaattatgcagcctactgtaggtcctgatggaaagaggaaagagctg
gagagtaacgtgcttcttgcttcaattgaaaatatgcagtatgctgtcactgtggatgtt
attcacacggtgttctctgcgtttggcactgtccaaaaaattgctatatttgagaagaat
ggccaaacacaagcattagttcaataccctgatctcaataccgcagcagttgccagagaa
gctctagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcgtatagcgacaaaagtagggactacactatccca
gatgctagtttgcttgcggcccaacaagtttctggttaccctcctccaggagcttggcag
aatcctcaggctgctccgatgtaccatggcaatgagtacagtggtgcagcttctgtgcag
gcccaagctcctccaggtcctccaggacaatccccatcatgggatccagccatgcaggca
ggcatatccacctttggttcggctcctagtacctttcctggtcaaccataccaagcatcg
tctggtcctgtatatgcctctgcagcaatgccagtgggttcttcgcctctccaatcaggc
ccaacttcttcgggtatgggttcctggggaatgtctcagccaggcgttccacccaatgtg
cgacctggtggtggtgcttcatctcccggggttcggcctcctggtgcctcaccatcctac
tacggccaatag
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integrated database retrieval system
