Malus domestica (apple): 103404487
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Entry
103404487 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103404487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103404487
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103404487
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Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103404487
NCBI-ProteinID:
XP_008341626
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All DBs
Position
17:complement(join(4242036..4242524,4242601..4242924,4243146..4243257,4243348..4243670,4243764..4243979,4244546..4245191,4245295..4245323))
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AA seq
712 aa
AA seq
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MSSSQFFLPRWTRVLRRQNSQSDDTDNTHNSNNIEDIINTPIISNSVECYACTQVGVPAF
HSTSCDAAHQPQWEASAGSSLIPIQSRSDLKKGLSRHRPASPFGPVLDPRSKRVQRWNRA
FLLARGMALAVDPLFFYALSIGRSGTPCLYMDGGLAAIVTVLRTCVDAVHLCHLWLQFRL
AYVSRESLVVGCGKLVWDARAISSHYLRSLKGFWFDAFVILPVPQAVFWLVLPKLIKEEK
IKVIMTILLLIFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAG
GCWYVLAIQRVASCLRQHCDQNVNCNLSLSCSDEVCYQFLLPASTSGSTCGGNTTASVMR
KPPLCLDVNGTFNYGIYQLALPVISSNSLAIKILYPIFWGLMTLSTFGNDLEPTSHWLEV
IFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSGLRRRVR
HYERHRWVTMGGEDEMDLIKDLPEGLRREIKRHLCLELIKKVPLFDNLDDLILDNICDRV
RPLVFSKDEKIIREGDPVPRMLFIVRGRIKRTQGLSKGMVGTNVLEPGGFFGDELLSWCL
RRPFIDRLPASSATFTCIESTEAFGLNAVDLRYITDHFRYKFANERLKRTARYYSSNWRT
WAAVNIQFTWRRYRLRTNRGPVIPVIPNGGSERKLLQYAAMFMSLRPHDHLE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagttcttcctcccaaggtggacccgagttctccggcgccagaactcc
cagagcgacgacaccgacaacacccacaactccaacaacatcgaagacatcatcaacacc
ccaatcatctccaactccgtcgaatgctacgcctgcactcaggtgggggtcccagccttt
cactccactagctgcgacgccgcccaccagccccaatgggaggcctccgccggctcttcc
ctgatccccatccaatcccgctccgatctcaaaaagggtctctcccgccaccgcccagcc
agccccttcggccccgtacttgacccccgcagcaagcgcgtccagcgctggaaccgcgcg
ttcctcctcgcgcgtgggatggcgctggccgtcgacccgctcttcttctacgccctctcc
attggaagaagcgggacgccctgcctatacatggacggcgggctagcagcaattgtcacc
gtgctccgcacatgcgtggacgccgtgcacctgtgccacctgtggctacagttccggctg
gcgtacgtgtcgagggagtctctggtggtcggctgcgggaagctcgtgtgggacgcacgt
gcgatctcctcccactaccttcgatctctcaaaggtttctggttcgacgccttcgtcatc
ctccccgttccccaggcagtattttggctggttcttccaaaattgataaaagaagagaag
attaaggtgatcatgaccattcttctcttaatttttttgttccaattcctcccaaaagtc
taccacagcatctccttgatgagaagaatgcaaaaggtcacaggctacatctttggcacc
atttggtggggctttggcctcaacctcatcgcctacttcattgcctctcacgttgctggg
ggatgctggtatgtgctcgcgattcagcgtgtagcttcgtgcctaaggcaacattgtgac
caaaatgtcaactgcaacctctctttgtcttgctcggacgaagtttgctaccagtttttg
ttaccagcctccacgagtggaagcacttgtggaggcaacacaacagcaagcgtgatgaga
aagccgccactctgcctggatgtcaatggcacatttaactatggaatctatcagttggct
cttcctgtcatttctagcaactcccttgctattaagatcctttatcccatcttttggggt
ttaatgactcttagtacatttgggaatgatcttgaacctacaagtcactggttagaagtg
attttcagcatatgcattgtgcttagtggcttgctgctattcactttgttgatcgggaac
attcaggtatttctccacgccgttatggcaaagaaaaggaagatgcagctgagatgcaga
gacatggaatggtggatgaagcggaggcagttgccttctggattgagacgaagagtacgc
cattacgaaaggcatagatgggtgacaatggggggagaagatgagatggatttgatcaaa
gacttgccggaagggctccggagggagattaagcgccatttatgcttagaactcatcaaa
aaggttcccctgttcgacaacttggatgatcttattcttgacaacatttgtgatagggtt
aggcctctggtcttctccaaagatgaaaagataatcagagaaggagatcctgtgccgagg
atgctatttattgtgcgtggacgcattaagcgtacccaaggcctaagcaaaggcatggtg
ggaacgaatgtgcttgaaccgggagggttttttggcgatgagctgctctcctggtgcctt
cgccggccattcatagaccgccttccagcctcatctgcgacattcacctgcattgaatca
acagaagcatttggcctcaatgcagtcgatctgagatacatcacggatcacttccgttac
aaatttgccaacgagaggcttaagcgaactgcgagatactactcttcgaattggagaaca
tgggcagctgtgaacatacaatttacttggcgtcgctacaggttgaggactaatcgaggt
ccggtgattcctgtgattccaaatggaggctctgagcggaagctgttgcagtatgctgca
atgttcatgtcacttaggccacacgatcaccttgaataa
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