Malus domestica (apple): 103404576
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Entry
103404576 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103404576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103404576
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103404576
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103404576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
103404576
NCBI-ProteinID:
XP_017192557
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All DBs
Position
14:complement(join(20244337..20244663,20245313..20245699,20246526..20246741))
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AA seq
309 aa
AA seq
DB search
MEEDSFVDSLTTYDGIYEGEDTYHRCRRSCHHRCRFLAPAKSNNRALSPATTVHELLECP
VCSKSMFPPIHQCPNGHILCSICKLTVNRCPACLEKLGDIRCLALEKVAESLELPSKYCS
LGCMEIFPYYIKLRHEAHCNYRPYSCPYPGCDECSEVGDVPFLVDHLREDHKVDLHIGPT
FNHLYVKSNSLEVECAARMLMVFNCYNKYFCLHFEAFHLGIAPVYIAFLRFMGDAAEARS
FSYRLEVGNNGRKLIWEGTPRSIRDSHQKVRNNHDGLIIQHNMALFFSGGDRKELKLRIS
GRIWKDNSN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacagttttgttgatagtttgacgacatatgatgggatctatgagggagaa
gacacttatcaccgctgccgacgctcttgccaccaccgctgccgtttcttggcaccggcc
aagtccaacaatagagcattgagtccagccacaacagttcatgagcttcttgaatgccct
gtctgctcaaagtccatgttcccaccaatccaccagtgccctaatggtcacattctttgc
tcaatctgcaagttgacagtgaaccggtgcccggcgtgtctagaaaaactcggagacatt
cgatgtctggcgttggagaaggtggcagagtcactagaacttccaagcaagtattgttct
ttggggtgcatggagatcttcccttactacatcaaactcaggcatgaggctcactgcaac
tacagaccatacagttgcccttatcctggatgtgatgagtgctcagaggttggggatgtt
ccttttttggttgaccatctgagagaagatcacaaggttgacttacacattgggccaacg
tttaatcacctctatgttaagtcgaatagcctcgaagtggagtgtgcagcaaggatgcta
atggtgtttaactgttacaacaagtacttctgtctgcactttgaagccttccacctcggc
atagctccggtctacattgcattccttcgcttcatgggcgacgcagctgaggcacgaagc
ttcagctacagactggaggtgggcaacaacggcaggaaactaatatgggaaggaacccct
cggagcatccgtgacagccatcagaaggtcaggaataaccatgacggtctcataatccag
cataacatggcactgtttttctcgggtggagacaggaaggagctcaagcttcggatctct
ggccggatttggaaggacaacagcaactag
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