KEGG   Malus domestica (apple): 103404581
Entry
103404581         CDS       T03194                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103404581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103404581
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103404581
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 103404581
NCBI-ProteinID: XP_028952912
LinkDB
Position
17:join(2710914..2711001,2711101..2711351,2711654..2711826,2711908..2712013,2712201..2712278,2712351..2712478,2712554..2712680,2712844..2712921,2713050..2713103,2713826..2714010,2714149..2715805,2715913..2716107,2716307..2716392,2716577..2716865,2716971..2717107,2717603..2717687,2717861..2718391,2718509..2719225)
AA seq 1654 aa
MGVHGLWELLAPVGRRVSVETLAGRRLAIDASIWMIQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQSKLRKTAEKLLLNHLKVMRLK
DLAADIKNQRQKNDAEGKEGLTNQTGRMADNSFEEDDLGLLSSNQEKLDEMLAASIQAEE
EGGFIKNASQSTAAEDGEEDDEEMILPEMDGEVDPAVLASLPSSMQHRLLLQKNKEENDA
KGKKILSDETEMLGINSENFDTVSRSCNQEMIDEMIAASIAAEKDAGVTNNASTSTASIL
VGDDIYEDDDADEEMILPALHGEVDPAVLAALPPSMQLNLLVQIRERLMAENRQKYQKVK
KDPEKFSELQIQSYLKTVAFRREIDQVQKAASGRGVSGVQSSRIASEAHREFIFSSSFTG
DKQVLASARADRNGEKQQAPKECPSKFRNSASSTSNVTGSAPDESTSVFDDNIETYLDER
GHLRVSRVRAMGMRMTRDLQRNLDLMKEIEREKTIANKTTDTRDMLNENSIDILKSSRRY
RTVTEIPRGDNGDSVDTGGVRKHPGQNKVDSSLGDNNSNDRNNQSMLKLETPIEISIEDN
GESKSFDGDHDFFASLVAGNPVTIDANDILKKHFSGSDSDCDWEEGIVEAKGSSFPNDSE
VKSKVPGDINDDSEVEWEEGVCGSAENTSSVPGEHGKTNSKGYFEEEASLQEAIRRSLED
MGSDKGNYGSPADEKLQCFGGEAHKGAECIDREIKIVEPVLLGKIGTQQNESSCDIGDGV
KKTNLGSPPAQAMQNVSEKENFCGGVQCTASITPSATKEVHVITEQVLGTFHGDGGLSTF
PENIEKNNAYSSDALSGDATGWVDDQKTEVEAESSCHLVEMANSESLTKKITNDSDADKK
WGKEKSHDICFQESEHSWDISSLKGDENARMEATEADLEEEMLILDQECMDLGDERRRLE
RNVESVSSEMFTECQELLQIFGIPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA
RSVYKNIFDDRKYVETYFMKDVENELGLSREKLIRMALLLGSDYTEGVSGIGIVNAMEVV
NAFPEEDGLHKFRDWIESPDPTILGTFDGEIGSNAKKRGSKFGDKDINTKSGMEEVSEQN
SCHGQEHQQSADLIEETKQTFMDKHRKVSKNWHIPPTFPSEAVTSAYICPQVDKSTEPFT
WGKPDHFFLRKLCSEKFGWASQKADELLIPVLNEYNKRETQLRLEAFYTFNERFAKIRSK
RIKKAVKGIAGNQSSELVDDAAHKVSRSRKKRTTSTDEAGNNKSEKLSEGTDKSVLKKQS
DSKGKSTAKQSRKRRTTEEPAPSKRPKPAEAGRSTNRKLHANGNERGRGRRVLGSGKEKV
NPNFEVSETSSGNGDDDNDGMDLHTDTIEGLGEMRRSGRLRKPVNYTVDDLDVDDLGEPL
DHSNAKCSNAETGEQVISRDEGKCEESASSLSEKKQQNEGNLSPNVGLHKDYLETGGGFC
PVEDETGEPGLSQHGDPSFGAEVSEDYLKTGGGFCGDESETGNDQDGIRVQTKTTASENS
DLPSFSGIVNMVDLGHISSQSSIGNKRPLVGFQSSERTDAYDTEQNINHETATITDDQTK
VNASLPENSVDNSRQPSGGALSAMPFLRKKRRKT
NT seq 4965 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggaactactggcccccgtcggccgccgcgtctctgtcgaa
actctagccggaagaagactcgcaatcgatgcgagcatatggatgatacagttcatgaag
gcaatgcgggacgagaagggagagatggtccgcaacgcgcatttgctcggcttcttccgc
cgaatttgcaagctgctgtacctgcggaccaagccggtgtttgtgtttgacggcggaacc
ccggccctcaagcgccggactgtgatcgctcggagaagacaacgggagaacgcccagtcc
aagcttcgcaagaccgccgagaaattgcttcttaatcatcttaaggtgatgaggctgaaa
gacttggctgcggatatcaagaaccagaggcagaagaatgatgccgagggtaaagaaggt
ctaacaaatcagaccggtaggatggcggataatagttttgaagaagacgacttgggtttg
ctgagtagcaaccaggaaaagctggatgaaatgttggcagcatccatccaggccgaggaa
gaagggggttttataaagaatgcatcacaatctactgctgctgaggatggtgaagaagat
gatgaagagatgatactaccagagatggatggtgaagttgatccagctgtattagctagt
ttgccttcatcaatgcaacatagacttcttttgcagaaaaataaggaggaaaatgatgct
aagggtaagaagattttgtcagatgaaactgagatgttgggtatcaattcagaaaacttc
gacacagtctcaaggagttgcaatcaagagatgatagatgaaatgattgctgcgtctatt
gcggcagagaaggatgctggtgtaactaataatgcgtcaacatcaactgcttctattctt
gtgggggacgatatctatgaagatgacgatgccgatgaagagatgatattgcctgcactg
catggtgaagttgatccagctgtattagctgcattgcccccatcaatgcaactcaatctt
cttgttcaaattagagagaggttgatggcggaaaacagacagaagtatcagaaagtcaaa
aaggaccctgaaaagttctctgagctgcaaatacaatcctatcttaaaactgttgctttt
cgtcgcgagatagatcaagtacagaaagctgcctctgggagaggggttagtggtgtgcag
agttcacgaatagcctctgaagcccacagagaatttatcttttcttcatcatttactggt
gataaacaagtacttgcatctgcaagagctgatagaaatggagaaaagcaacaagcaccc
aaagagtgtccttcaaaattcaggaacagtgcttcgtctaccagtaatgtgactggatca
gctccagatgaatccacaagtgtttttgatgacaacattgagacatatttggatgagagg
ggccatcttcgagtcagtagagtgagagctatggggatgcgtatgacccgtgatttacag
aggaacttggatttgatgaaggagattgaacgggagaaaacaattgcaaacaagacgact
gacactagggatatgctcaacgaaaatagcattgacattttgaaaagttcacgtagatat
agaacagtcacagaaataccaagaggtgataatggtgattctgttgatactggaggggtg
agaaagcatcctggtcagaacaaggttgactcctcacttggtgataataactcaaatgac
agaaataatcagtctatgttaaaacttgaaactcctatagaaatatctattgaagacaat
ggcgagagcaagtcatttgatggtgatcatgatttttttgcttcgttagtagcaggaaat
cctgtaactattgatgctaatgatatattaaaaaagcatttttctgggtctgactcagac
tgtgactgggaggaagggattgttgaagcaaaaggtagcagttttcctaatgactctgaa
gttaaaagtaaggtgccaggcgatattaatgatgacagtgaagtggaatgggaggaagga
gtttgtggtagtgctgaaaatacctcatctgttcctggtgagcatggaaaaacaaattct
aaaggttatttcgaagaagaggctagtttgcaggaggcaatacggagaagtcttgaggat
atggggagtgacaagggtaattatggatcacctgctgatgaaaagttgcaatgttttgga
ggagaggctcataaaggtgctgaatgtattgatagagaaattaagatagttgaaccagtt
ttgttggggaagattggtactcaacaaaatgaatcatcctgtgacattggtgatggagtc
aaaaagacgaacttgggttctcctccagcacaagcaatgcagaatgtaagtgaaaaggaa
aatttctgtggaggagtgcaatgcacagcatctattactccgtcagcgacaaaggaggtc
catgtgattactgaacaagtattgggtactttccatggtgatggtggtttatccaccttt
cccgagaacattgaaaaaaataatgcttattcttcggatgccttgtcaggtgatgctact
ggttgggttgatgatcagaagactgaagttgaagctgagtcatcttgtcatttagttgag
atggctaactctgagtcattgacaaaaaagataacaaatgacagtgatgctgacaaaaaa
tggggcaaggaaaagagccatgacatttgttttcaggaaagtgagcacagttgggacata
tcttctctcaagggtgatgagaatgcacgtatggaagccacagaggctgatttggaggag
gaaatgctaattctagaccaagaatgtatggatctgggtgatgagcgaagaaggcttgaa
cgtaacgtagaatctgtcagcagtgaaatgttcaccgaatgtcaggagctactgcaaatt
tttggtataccatacattattgcaccaatggaagcagaagcccagtgtgcgtatatggaa
cttgccaaccttgttgatggtgtggtaactgatgattctgatgtgttcttgtttggggca
cgaagtgtttacaaaaatatattcgacgatcggaagtatgttgagacatatttcatgaag
gatgttgagaatgagcttggcctaagcagagagaaattaattcgtatggcacttcttctt
ggaagtgattatactgaaggagttagtgggatcggcattgtcaatgctatggaagttgta
aatgcatttcctgaggaggatggcctccataaattccgggattggattgaatcaccagat
cctaccattctagggacgtttgatggagaaataggatctaatgcaaagaaaagggggtct
aaatttggagataaggatatcaatacgaagagcggtatggaagaagtctctgagcaaaat
agttgtcacggacaagagcaccagcagtcagctgatcttattgaagaaacaaagcaaact
ttcatggataagcatagaaaagtgagcaaaaattggcatattccccccactttcccaagt
gaagcagtgacttctgcttatatttgtccacaggtggacaaatcaactgaacccttcaca
tggggaaagccagatcatttttttcttcgcaaattatgttcggaaaagtttggctgggct
agccagaaggcagatgaattgctaatacctgttctgaacgagtacaacaaacgcgagact
caactgcggctggaagctttttacacttttaatgaaagatttgcaaaaattcgtagtaag
agaatcaagaaagctgtaaaaggaattgcaggaaatcaatcttcagagttggtggatgat
gctgcacataaagtttcaagaagcagaaagaagagaaccacaagtactgatgaagctggg
aataacaaatcagagaaactgtcagagggaacagataaaagtgttcttaagaagcagagc
gattctaagggaaaatcaacagctaagcagtcgaggaaaaggaggaccactgaagagcct
gctccatctaagcgaccaaagcctgctgaagctggacgatcaaccaatagaaaattgcat
gcgaatggaaacgaaagaggaagaggcaggagggtattaggaagtggaaaggaaaaggta
aatcccaattttgaagtatctgaaaccagctctggcaatggtgatgacgataatgatggg
atggaccttcataccgatacaatagaagggttgggagaaatgcgcaggtctgggcgtctg
cggaagcctgtaaattacacagtcgatgacttagacgttgatgatcttggtgagccacta
gatcacagtaatgcaaaatgctccaatgcagagacaggggaacaagttatatctcgggat
gaaggaaaatgtgaagaaagtgcttcttctctcagcgaaaagaaacagcagaatgaaggg
aacttgtctcccaatgtgggcctgcataaagattatcttgaaacaggaggtgggttctgc
ccggttgaagatgaaactggtgaaccaggtttaagccaacatggtgatccttctttcggg
gctgaggtttctgaagactaccttaagacaggaggggggttttgcggagatgaaagtgag
actggtaatgaccaagatggaattcgtgttcaaacgaaaacaacagcttcagagaattct
gatcttcccagtttctctggcattgtcaacatggttgatcttggtcatatttcatctcaa
tccagcatcggcaacaaaagaccattagtcggatttcaaagtagtgagaggacagatgcc
tatgataccgaacagaatataaatcatgagactgctacaattaccgatgatcaaacgaag
gtcaatgcgtcattgccggaaaatagcgtggataattctcggcagccatccgggggagct
ctgagtgcaatgcctttcctgaggaaaaaaaggaggaagacctga

DBGET integrated database retrieval system