Malus domestica (apple): 103404991
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Entry
103404991 CDS
T03194
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103404991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103404991
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103404991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103404991
NCBI-ProteinID:
XP_008342177
LinkDB
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Position
17:complement(join(9741813..9741826,9744004..9745213,9745576..9745797))
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AA seq
481 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA
DSVIMEKHNIDGRMVEAKRAVPRDDQNILGRSSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPIGGYNYGLSRVNSFLNGYTQGYTPNAGGGYGLGRFSPVAGGRSGFP
PFGSGYGMGMNYEPGLSPGFGGNANYNNNNNNNNMNYGRGGLSPYYINNSNRFSNPIGYD
GGNGGNTSSFFSSVTRNLWGDGGGGLNSTNSNAYIRSGSGTIGGSTFGNTGANWPSSVMP
AQGGGNNVSNNSRNLGYGVGDNSYGLGTGGYGRNSGASVAPTSSFAASNGGGFDGSLADL
YSSNSVYGDPTWRSSNSEQDGSVPFGYGLGGTASDVSAMSSPGYVGGYSVNKRQSNTGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggtaagttgtttattggcggcatatcttgggatacaaatgaagag
cgtctaaaagagtatttcagtagttttggggaggtggtagaagcagtgatcatgaaagat
cggaccacaggccgtgctcgtggtttcggttttgtagtattttctgacccagcggttgcg
gacagcgtcataatggagaagcacaacattgatggaaggatggttgaggccaaaagggct
gttccaagggatgaccaaaacatattgggaagaagcagtggcagcatccatggttctcca
ggtccaggccgcacaagaaaaattttcgttggaggtttagcatccactgtcacagagagt
gacttcaagaagtactttgagcagtttgggacaatcacagatgttgtggtgatgtatgat
cacaacacccagagaccgagaggctttggattcatcacttatgattcagaagaggcagtg
gacaaggttttgcttaagacatttcatgaactgaacgggaagatggttgaggtcaagcgt
gcagttcccaaagagttatcgcctggccctagtcgcagccctattggtggatacaactac
ggtctgagtagggtcaatagcttccttaatggctacactcaggggtatactccaaatgca
ggtggaggctatggacttggtagattcagtccagttgctggtggtcgtagtggatttcct
ccatttggttctggttatggaatgggtatgaattatgagccagggttgagcccaggtttt
ggagggaatgcaaattataataataataataataataataatatgaactatggacggggt
ggattgagtccttattatatcaataattcaaataggtttagcaatcccattgggtatgat
ggcggtaatggaggaaacacatcttcatttttcagctcagtgactcgaaacttgtggggg
gatgggggtggtggtcttaactccacaaattctaatgcttacatcagatcaggaagtggg
accattggaggaagtacatttggaaatactggagctaattggccttcttcagtaatgccg
gctcaaggcggaggaaataatgtttctaacaatagcaggaaccttggttatggagttggg
gataacagttacggtctgggaactggagggtatggaagaaacagtggtgcaagtgtggcc
cctacatcttcatttgctgcatcaaatggtggtggtttcgatgggtccttggctgacctt
tacagtagtaattcagtttatggagaccctacttggagatcatcaaattccgagcaagat
gggtctgttccttttggttatgggcttggcggcacagcttctgatgtttcagctatgagt
tctcctggttatgttggtggttatagtgttaataagagacagtcaaacacaggaatcgct
gcctag
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integrated database retrieval system
