Malus domestica (apple): 103405018
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Entry
103405018 CDS
T03194
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103405018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103405018
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103405018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103405018
NCBI-ProteinID:
XP_008342216
LinkDB
All DBs
Position
03:join(25507508..25507729,25508012..25509203,25509723..25509736)
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AA seq
475 aa
AA seq
DB search
MEPDHGKLFIGGISWDTDEERLKEYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
ERVVMDKHMIDCRTVEAKKAVPKEDQHILNRTGVVNGSPSPGRTKKIFVGGLASTVTESD
FKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLLKTFHELNGKMVEVKRA
VPKGLSSGPSRSPMIGHNYSPGRTNSFLNSYAQSYNMSPIGGFGISMDTRFSPISSGRSR
LSPFGPSGYGLGMNLEPGLSPTYGGNSNFGSSLGYARMLSPFYSGNSHRYNTPVGYNVGN
GRSSPVLNTTTRNVWGNSGINNNLNPASTGAYLTSSNGGFEVARNNGSNWGANSFTTESR
GIASGYNSANGYGSGSSSFGLGGGGYGRNGDTCVAPTSSFPGSTTGYEGSYGDLYQNSSV
YGDSTWRSSSPDLDGSSTFGYGLGDLPADVTAKSSGGYIGGYNVTSRQPNRGIAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagatcatgggaagctcttcattggtgggatttcctgggacacagatgaggaa
cggctcaaggaatatttcaggaagtatggagaggttgtggaggctgtgatcatgagggat
cgtgcaaccggtcgtgctcgtggttttgggtttgttgtctttgcggatcctgcagttgca
gaaagagtagttatggataagcacatgatcgattgccgcacagtggaagcaaagaaggct
gttcctaaggaggatcagcacattttaaacagaactggggttgtcaatggttcccccagt
cctggacgcacaaaaaagatttttgttggaggtttagcgtccacagtcaccgagagtgac
tttaagaagtactttgatcaatttggaacagtcactgatgttgtggtaatgtatgatcac
aacacacaaaggccaagaggctttggttttattacttatgactcggaggaggctgttgac
agagttctgcttaaaacatttcatgaactcaatggtaagatggttgaggtcaagagggca
gtccctaaagggctatcctcagggcccagccggagccctatgataggacacaactatagt
ccgggtaggaccaatagtttcctcaacagctatgctcaaagttataatatgagcccgatt
ggaggttttggcatcagtatggacaccaggttcagtccaatctctagtggtcgtagccgg
ttgtctccatttggcccttctggatatggattaggtatgaatctggagccagggttgagc
ccaacgtatggtggtaattccaactttggcagtagtctaggatatgcacgaatgttgagc
cccttttatagtggcaattcacacaggtataatacccctgttggatataatgtgggtaat
gggaggagcagtcctgtattaaacacaactactcggaatgtctggggaaacagcggcatc
aacaataacttgaaccctgccagtaccggggcttacctgacctcttcaaatggaggtttt
gaagttgcgagaaataatggctcaaattggggtgctaattcttttacaactgaaagtaga
ggcattgcttcaggctataatagtgctaatggttatggaagtggaagtagcagctttgga
ttgggagggggaggatatggaagaaacggtgacacttgtgtagccccaacatcatcattt
cctggatcaactactggttatgaggggtcttatggggacttgtaccagaacagttcagtt
tacggcgactcaacttggcgctctagcagtcctgatctagatggttctagcacgtttggt
tatgggctgggcgatttacctgcagacgtcacagccaaaagttctggtggctatattgga
ggttacaatgttaccagtagacaaccaaatagaggaattgctgcttag
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