KEGG   Malus domestica (apple): 103405095
Entry
103405095         CDS       T03194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
  KO
K20299  vacuolar protein sorting-associated protein 53
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103405095
Membrane trafficking [BR:mdm04131]
 Protein recycling
  Others
   EARP complex
    103405095
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    103405095
SSDB
Motif
Pfam: Vps53_N VPS53_C COG7 COG4_N RINT1_TIP1 Vps54_N XhlA MPH2 Colicin Rv0250c EXOC6_Sec15_N Bestrophin-like
Other DBs
NCBI-GeneID: 103405095
NCBI-ProteinID: XP_008342281
LinkDB
Position
17:complement(join(10996099..10996401,10996694..10996789,10996871..10996939,10997206..10997268,10997623..10997700,10997956..10998049,10998131..10998264,10998342..10998419,10999167..10999232,10999322..10999429,10999718..10999795,11000161..11000220,11000315..11000419,11000825..11000860,11000958..11001143,11002062..11002125,11002751..11002892,11003002..11003162,11003445..11003569,11003921..11003991,11004142..11004292,11004432..11004488,11004603..11004697,11004840..11004888))
AA seq 822 aa
MDKSSTLEYINQMFPTEASLSGVEPLMQKIHGEIRRVDAGILAAVRQQSNSGMKAKEDLA
AATRAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDSAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKKAAAQLEAVNQLCSHFEAYQDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPTSWHVPYRLCIQFCKKTRKQLEDIHNNQKENPDV
GILLLALQRTLEFEDELAEKFGGGTRGREIGNEIEEIGRGENSSQSASDIRKKYEKKLAA
HQESSTEEKDKELSAPAAGFNFRGIISSCFEPHLNVYTELEEKTLMENLEKLVQEETWDI
EEGSQNNVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKGYATKLFARIPKG
GTGIVAAATGMDGQIKTSDRDEKVICYIVNSAEYCHKTSGELAESVSKIIDTQFADGVDM
SEVQDEFSAVITKALVTLVHGLETKFDAEMAAMTRVPWATLESVGDQSEYVNGINMILAS
SIPILGTLLSPIYFQFFLDKLASSLGPRFYTNIFKCKQISETGAQQMLLDTQAVKTILLE
IPSLGHQTSRAASYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRILE
LKGLKKADQQSILDDFNKHGPGITKPALQPPAAPTIPLPTAPAAALIQNPTSAALIASRD
DVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggataagtcaagcactttggaatacatcaaccagatgttccccacagaggcgtcttta
tctggtgtggagccgctaatgcaaaagatacacggtgagattcggcgagtagatgctgga
attttagccgcggttcgccagcagagcaattcgggcatgaaagcaaaagaagatcttgct
gccgctacacgtgccgtggaggaactcatgtataaaatccgcgaaattaaaacgaaagct
gagcaaagcgagacaatggttcaagaaatatgtagggatattaagaagttagactctgca
aagaagcatataacaacgacgattactgctcttcatcgcctaaccatgcttgtctctgct
gttgagcagcttcaagtaatggcttcgaaacgacaatataaaaaggcagccgcacagttg
gaggcagtgaaccagttatgtagccattttgaagcttatcaggacattccaaagatcaca
gagttgagggaaaaatttaagaatatcaaacaaatactaaagtcgcacgtgttttctgat
ttctcaagcttaggtactggaaaggagacggaggaaacaaatttacttcagcagttatct
gatgcttgcctggttgttgatgctttggagccatctgtgagggaagaactagtaaataac
ttttgcagcagggagcttacttcatatgagcagatatttgaaggagctgaactagctaag
ttggataaaactgaacgaagatatgcatggatcaagcgtcgtatgagaacaaatgaagaa
atttggaaaatctttcctacttcatggcatgttccttatcggctctgtattcagttctgt
aaaaaaacaagaaagcagctggaagatatacataataatcagaaagaaaatcctgatgtt
ggcatattattgttggcactacagcgaactcttgaatttgaggatgaattggcagagaaa
tttggtggtggtactcgaggcagggagatcggaaatgagattgaagaaattggtagaggg
gaaaactctagtcaaagtgcctcagatattagaaagaagtatgaaaagaagcttgctgca
catcaggaaagtagcacagaggaaaaggataaagagttatcagctcctgcagctgggttc
aacttccgtggaatcatttcatcttgctttgagcctcacttgaatgtttacacagaacta
gaagagaagacactgatggagaatttggagaaacttgttcaggaggaaacatgggacatt
gaggagggaagtcagaataatgttttatcaagtagcatgcagttgtttcttataatcaag
aggagcttaaagagatgcagtgctttgacaaagaaccagacattatttaatttgttcaag
gtgtttcaaaggattctcaaaggatatgctaccaagctttttgcaagaatacctaaaggt
ggtacaggaattgttgcagcagcaactggtatggatggacagataaagacatctgacaga
gatgaaaaggtgatttgttacattgtcaactcggcagaatactgccataagacgtctggt
gaactggctgaaagtgtatccaaaataattgatactcagtttgctgatggggtggatatg
tcggaagtgcaggatgaattttcagccgttataacaaaagcattggtaaccttggtgcat
ggcctagaaactaagtttgatgctgaaatggctgcaatgacacgagttccatgggctacg
cttgaaagtgttggtgaccaatcagagtatgttaatggcataaatatgatccttgctagt
agtattcctatacttggaacacttctctcaccaatttacttccaatttttcttggacaag
cttgcatcatctcttggtccgcgtttctatactaacattttcaaatgcaagcaaatatca
gaaactggagctcaacaaatgctactggatactcaagctgtaaagacaattcttttggag
ataccatcccttggtcaccaaacttcacgtgctgctagctattcgaaatttgtaagccgg
gagatgagcaaagctgaagcacttctgaaggtcattctgtcgccaattgattctgttgcg
gatacatatcgtgcgttgctaccagagggaacgcccatggagtttcagagaattttggag
ctcaagggtcttaagaaagcagatcagcaaagcatactagatgactttaacaagcatggc
ccgggaatcacaaaacctgctctccaacccccggctgccccaactatcccactcccaact
gcccccgcagctgctctgatacaaaatcctacttcagccgcccttattgcatccagagac
gatgtgctaaccagagcagctgcactcgggcgaggtgcagccacaacagggttcaagagg
ttcctggcgttaaccgaagctgcaaaagatagaaaagacgggcctttcagaaagctcttc
aacgcatga

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