KEGG   Malus domestica (apple): 103405108
Entry
103405108         CDS       T03194                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103405108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103405108
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103405108
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103405108
SSDB
Other DBs
NCBI-GeneID: 103405108
NCBI-ProteinID: XP_008342293
LinkDB
Position
17:complement(join(11371320..11373394,11374569..11374644,11375366..11375422,11375743..11375891,11376605..11376659))
AA seq 803 aa
MERSNGTDFRDLLERSSSENKLFDASQYEFFGQNLVDEVELGGLDDEEDRKPLFGPVDNE
YHLFEKEEGLGLGSLSDIDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWA
QDGDFNNWLDQHMFDTEISQEGKRWSSQPQPSSALFSESKQQKPLYRTSSYPDQQPVQHH
FSSEPIVPPKSAFTSFPPPGNKFQQGSPHQLNLSAVAGGSQLPFSAPNLSPLSNSNLHMA
SLPLGLHYGGNMPQFANPGLPFNSRSQNHWVTHAGVLHSDHSSLINNILQQQLPHQDGLI
SPQLLAAQQQLQQQRLHHSVQPSLAHFAAMQSQFYGTHPSSSHKSMHGLSDVRDHRPKRG
KQRFSQGSDAGSQKSETGWIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQASLS
KKAAGSRSKHPFCPSHLRESPSRGRNSTDQHTHSSVDALGRIPLASIRRPRPLLEVDPPP
GSGDGKQASEKPLEQEPMLAARIAIEDGLCLLLDVDDIDRLLQGQPQDGGVQLRRRRQIL
LEGLAASLQLVDPLGKGSHSAGLAPKDDLVFLRIVSLPKGRKLLSRFIQLLFPGSELARI
VCMTVFRHLRFLYGGLPSDPAAAETTTNLAKTVSTCINGVDLRALSACLVAVVCSSEQPP
LRPLGSPAGDGATIILKSVLERATVLLSDPHAAGSCSISNRTLWQASFDEFFGLLTKYCL
SKYETIVQSIFTQSQQSAEVIGSEATRAIHREMPVELLRASLPHTDEHQRKLLSDFSHRS
MPISGLNAHGGSGGQMNSESVRG
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggagagatctaatggtacagatttcagggacttgcttgagcgttcctcatcagagaat
aaactctttgatgcgtcacaatatgaattttttggtcaaaatctggtggacgaggttgag
ttggggggtttggacgatgaggaagacaggaaacctttattcgggcctgttgataatgag
taccatttatttgagaaagaagagggtcttggtttgggatctttatccgacattgatgat
ctggcaagtacttttgcaaagttaaacaaagttgtaacaggaccaagacatccaggagtt
attggcgacagaggttcaggatctttttcacgggaaagttcatcagctactgattgggcc
caagacggagatttcaataactggttagatcagcatatgtttgatacagaaatttcccag
gaaggaaagaggtggtcttcacagccccaaccttcttctgctctattttcagaatcaaaa
cagcaaaagcctttgtacagaacatcttcgtacccagaccagcagccagtccagcatcac
ttctctagtgaaccaattgtaccgcccaagtcagcattcacatcattccctcctcctgga
aacaagttccagcagggttcaccacatcagctgaatctttctgctgttgctggtggttcc
cagttgcctttttctgcaccaaacctttctcctttatctaactctaatcttcatatggcc
agtttacctcttgggttgcattatggagggaacatgcctcagtttgccaaccctggcctt
cctttcaatagcaggtcacaaaatcattgggttacccatgctggagtattgcacagcgat
cattccagcctcataaacaatatattgcagcaacagctccctcatcaagatggacttatt
tccccacaattactggcagctcagcagcagctacaacagcagagattgcaccactcggtt
cagccatctttggcccattttgctgcaatgcagtctcagttttatggtactcatccttct
tcatctcataagtcaatgcatgggttgtccgacgtaagagatcatagaccgaaaagagga
aaacaacgtttttctcaaggctctgatgctggtagtcagaaaagtgagactgggtggatc
cagttcaggtctaagcacatgacatctgaagagatagagagtattcttaaaatgcagcat
gcagcaacacatagcaatgacccctatattgatgattactaccaccaggcaagtctttcc
aaaaaagcagctggctcgcgatcgaaacatcctttttgcccatctcatcttagagagtcc
ccctcccgaggtcgtaatagtactgatcagcatactcatagttctgttgacgctcttggg
agaattcctcttgcttccatacgtaggcctcgccccctccttgaagttgatcctccccct
ggttctggtgacggcaaacaggcctctgagaagcctctggagcaggaacccatgcttgct
gctagaattgccattgaggatggcctttgtctccttcttgatgttgatgacattgatcga
ctgctacaaggtcagccccaagatggtggggttcaactcaggcgaaggcggcaaatactg
ctagaagggttggcagcatcgcttcagcttgtcgacccacttggtaaaggcagccactca
gcgggtttggctccaaaggatgaccttgtgttcctacgtatagtttctcttcctaagggg
cgcaagctcctttctaggtttattcagcttctcttccctggtagcgagcttgcccgtatt
gtctgtatgacagttttccgtcatttaaggtttttgtatggcggtctaccctctgatcct
gcagctgctgagacaactactaatcttgcaaagacagtttctacatgcataaatggtgtg
gatcttcgtgcattaagtgcttgtcttgttgcagttgtttgttcatcagagcagccacca
cttcgaccccttggaagccctgctggagatggggccactattattctaaaatctgttctt
gaaagggcaactgtactcttaagcgaccctcacgctgctggaagctgtagcatttctaac
cgcaccctttggcaggcatcctttgatgaattttttggtctgctcaccaagtattgcctg
agtaagtatgaaactatagtacaatcaatatttacacagagtcagcaaagtgcagaagtt
attggttcagaggccaccagggcaatacatcgtgaaatgcctgtggagcttctgcgtgct
agtcttcctcacacagatgagcatcagcggaagcttttgtcagatttttctcatcgatca
atgcccatttctggtcttaatgcccatggtgggagcggaggtcaaatgaactctgaatca
gtgaggggataa

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