KEGG   Malus domestica (apple): 103405201
Entry
103405201         CDS       T03194                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
mdm04517  IgSF CAM signaling
mdm05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    103405201
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103405201
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    103405201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103405201
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mdm04812]
    103405201
Membrane trafficking [BR:mdm04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    103405201
Cytoskeleton proteins [BR:mdm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     103405201
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st WDR55 EIF3I Beta-prop_EML Tricorn_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st PD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_SPT8 eIF2A WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_NUP159_NUP214 Ge1_WD40 DUF2582 BNR_3
Other DBs
NCBI-GeneID: 103405201
NCBI-ProteinID: XP_008342395
LinkDB
Position
17:complement(join(13105646..13105710,13105838..13105896,13106051..13106157,13106329..13106392,13106468..13106553,13106641..13106729,13106879..13106960,13107366..13107408,13107509..13107582,13108145..13108214,13108371..13108440,13108548..13108642,13108733..13108809,13109436..13109521,13110065..13110134))
AA seq 378 aa
MAAVEVHKFAQCITCHAWSRDRSMLAFCPNNNEVHIYALLQGKWEKLHVLQKHDQIVSGI
DWSARSNKIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVKWSPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRIFSTFIKVVDA
KESRTGPFADSKFGEQILQLDLSFSWSFGVRWSPSGSTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFLSERLLIGVGFDCNPMVFAADLHGIWHFIKFLGERKTTSSGPKYG
SQFSEAFGKLYGQQKHGLNNDTNEHSRSRGGVHENCINCIVPLGEPGSSKVTRFSTSGLD
GKVVVWDMENQADLSEYL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcggcggtggaagttcacaagttcgctcaatgcattacttgccatgcttggagccgt
gatcgctccatgctggcattttgtccgaacaacaatgaagttcacatctatgctctgttg
caaggcaagtgggagaagctgcatgttcttcagaagcatgaccaaattgtatctgggata
gattggagcgcaaggtcaaacaaaatagttactgcatctcatgatcggaattcctatgtc
tggaatctagaagggtctgagtgggtaccaacccttgttatccttcggctaaatcgcgct
gcactttgtgttaagtggagtccaagagaaaataagtttgctgttggaagtggggcaaaa
actgtttgtatatgctactatgagcaagaaaataactggtgggtcagtaaacttatcaga
aaaaggcatgactcttctgtgacaagtgttgcgtggcatcccaataatattcttcttgca
acagcatctacagatggaaaatgccgtatattttccacttttattaaggtcgtcgacgca
aaggaatcaagaacaggcccatttgctgattcaaaatttggagagcaaattcttcagctt
gatctctcattttcctggtcatttggcgtgaggtggtcaccgagtggcagtaccttagca
tatgtaggccataattctatgatttacttcgttgatgatgtgggaccttctcctttggct
cagaatgttgcattccgtgatttgcctctccgtgatgtgttatttctttctgaaagatta
cttataggtgtgggatttgattgcaatccaatggtttttgcggcagatttacatggaata
tggcattttatcaaatttcttggggaaagaaagacaacatcttcaggtccaaaatatggt
tcacagttttctgaagcatttggaaagctatatggccaacagaaacatggattgaacaat
gatacaaatgaacattcaagatcacgaggaggcgtccatgagaactgcattaattgtatc
gtgccacttggagaaccagggagttctaaagtaacgcgcttcagcacatcaggattggat
ggaaaagttgttgtgtgggatatggagaaccaagcagatttatcggagtatttgtga

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