Malus domestica (apple): 103405286
Help
Entry
103405286 CDS
T03194
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00906
Carotenoid biosynthesis
mdm01100
Metabolic pathways
mdm01110
Biosynthesis of secondary metabolites
Module
mdm_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103405286
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdm01006
]
103405286
Enzymes [BR:
mdm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
103405286
Prenyltransferases [BR:
mdm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
103405286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
103405286
NCBI-ProteinID:
XP_028953640
LinkDB
All DBs
Position
17:complement(join(12113396..12113768,12113980..12114215,12114324..12114496,12114582..12114632,12115810..12116167))
Genome browser
AA seq
396 aa
AA seq
DB search
MSGVLLWVVSPKENASSPLGLLPRICTPRRSKLCSKLGFSSGVLAYSGAVANPARSSEEK
VYEVVLKQAALVREPNTVKKKSLDLDERITEGLNNWDLLNKAYDRCGEVCAEYAKTFYLG
TLLMTPERRRAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGRPYDMYDA
ALSDTVAKYPVDIQPFRDMVEGMRLDLRKSRYQNFDELYLYCYYVAGTVGLMSVPVMGIS
RESKASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDDDIFRGK
VTDKWQSFMKGQIKRARMFFDEAEKGVSELNSASRWPVWASLLLYRQILDAIEANGYDNF
TKRAYVGKAKKLASLPVAYGRAILGPSNLTKQLVPR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgttcttctctgggtggtgagtcccaaagagaatgccagctctccgctgggt
ctgttgccgagaatttgcaccccaaggaggtctaaattgtgctcaaagctgggtttttca
agtggggttttggcctactcgggtgcagttgcaaacccagccagatcttcagaggagaag
gtgtatgaagtggtgctgaagcaggctgctctagtgagagaaccgaacacggtaaaaaag
aaatctttggatttggatgaacggattactgaaggtttgaacaactgggatttactgaat
aaggcgtatgaccggtgtggtgaggtctgtgcagagtatgccaagactttttacctaggg
acattgctcatgacaccggagcggcgacgagctgtttgggcaatctatgtgtggtgcaga
aggacggatgagctagtggatggacctaatgcttcatacattacacccaaagctcttgac
agatgggagaaaagactgacagatctcttcgaaggccggccttatgatatgtatgatgct
gctctatctgatacagtcgccaagtaccctgttgacattcagcccttcagagacatggta
gaaggaatgagattagacttgagaaaatcaagataccagaactttgatgaactttacctt
tactgctactatgttgctggaactgttggattgatgagtgttccggtaatggggatatcc
cgggaatcaaaggcctcaacagaaagtgtttacaatgctgcattggcccttggaattgct
aatcagctcactaacattctcagagatgttggagaagatgctaggagaggaaggatatat
ctcccacaagacgagcttgcccaagccggcctatcagacgatgacatctttcgcgggaag
gtgactgacaagtggcaaagtttcatgaagggacaaataaagagagctaggatgttcttt
gatgaggctgagaagggtgtctcagagctcaactcagctagtagatggccagtatgggca
tctttgttgctgtacaggcagattctagatgcaattgaagcaaatggttatgacaatttc
acaaaaagggcatatgtgggaaaagcaaagaagttagcatcattgcctgtggcctatgga
agggccattttaggaccctctaatttaactaagcagttggtgcctagatga
DBGET
integrated database retrieval system
