KEGG T03194: 103405491

Malus domestica (apple): 103405491

Entry

103405491         CDS       T03194

Name

(RefSeq) coatomer subunit beta'-2

K17302

coatomer subunit beta'

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103405491
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103405491
Membrane trafficking [BR:mdm04131]
Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    103405491
Exosome [BR:mdm04147]
Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   103405491

SSDB

Motif

Pfam:

B-prop_COPA_B_2nd TPR_COPA_B Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR41 DSE1_N Beta-prop_IFT140_1st ASA1 ANAPC4_WD40 CFAP251_N Beta-prop_HPS5 Beta-prop_WDR19_1st NBCH_WD40 PEP5_VPS11_N Beta-prop_Aladin Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 TRM82_WD Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd TPR_2 TPR_1 WD_LRWD1 WD40_like TPR_12 TPR_CcmH_CycH PH_SPO71 Clathrin

Other DBs

NCBI-GeneID:

103405491

NCBI-ProteinID:

XP_008342720

LinkDB

Position

17:join(23847863..23847865,23848271..23848291,23848417..23848478,23849050..23849104,23850029..23850065,23850175..23850500,23850591..23850722,23850816..23850964,23851150..23851218,23851436..23851586,23851685..23851750,23852220..23852408,23852672..23852812,23852895..23852969,23853086..23853354,23853465..23853581,23854146..23854260,23854370..23854441,23854591..23854787,23854873..23854966,23855719..23855825,23856044..23856176,23856300..23856450,23857050..23857069)

AA seq 916 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKSSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSTDGEYAVRESTSKIKIFTKNFQ
EKRSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDIVSSYLDSGRPVDEQGVEDAFELLHEMNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDIERANEVLPSIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLEIAKE
IATEVQSESKWKQLGELAMSAGKLDMAEECLKHAMDLSGLLLLYSSLGDAEGISRLAVLA
KEQGKNNVAFLCLFMLGRLEECLELLVESNRIPEAALMARSYLPGKVSEIVAIWRKDLSK
VNPKAAESLADPEEYPNLFDDWQVALSVESKAAETRGVYPPAEEYVNHVDKAHITLVEAF
RNMQLEEEEEPLENGEASHEVPEQNGEENGVQAAEEQDGEEGSQEEAVVVDADSTDGAEL
INGNEADEEWVLTPRH

NT seq 2751 nt +upstreamnt +downstreamnt
atgcctctcagactggaaatcaagagaaaactcgctcaaagatcagagagagtaaaatct
gtggatctgcatccaacagaaccatggattttggcaagtttatattcagggactgtttgt
atttggaactaccagacgcagaccatggctaagtcttttgaggtcacagagttaccagtt
agatcagccaaatttatctcacgcaagcaatgggttgttgctggagccgatgacatgttt
attcgtgtatacaattacaatacaatggataaggttaaagtatttgaggcacatacagac
tacattagatgtgtggctgtccatcctacactcccttatgtgctatcatcatccgatgat
atgcttatcaagctctgggattgggacaagggttgggtttgtactcagatatttgaagga
cactcccattatgttatgcaagtgacattcaatccgaaagataccaacacatttgcaagt
gcatctcttgatcgcaccataaagatatggaatctaggctccccagacccaaattttacg
ttggatgcccatcagaaaggagtaaattgtgtcgattactttacgggtggtgataagcct
tatctgattactggatctgatgatcacactgctaaggtgtgggactatcaaaccaaaagt
tgtgtccagacacttgaaggccatacacacaatgtttctgctgtatgtttccatcctgag
cttcctattataataacagggtcggaggatggaacagttcgaatatggcattcaaccact
tacaggcttgagaacacattgaattatgggcttgaaagagtttgggctattggatacatg
aagagttcaaggcgggttgtaatcggttatgatgaaggaaccattatggtaaaacttggc
cgtgaagtacctgttgcaagtatggacaatagtggaaagatcatttgggctaagcataat
gaaattcaaactgtgaacattaagagtgtgggagctgattttgaggttaccgatggagag
agattgcctttggctgttaaggagttgggtacatgcgatctttaccctcagagcttaagg
cataatcccaatgggaggtttgttgttgtttgtggagatggagagtacattatttatact
gctttagcctggagaaatcgttcatttggttctgctttggaatttgcttggtcaacggat
ggagaatatgctgttagagagagtacttcgaagattaagattttcactaaaaacttccag
gagaagaggagtattcgacctacattttcggctgaacatatttatgggggaactttattg
gcaatgtgctcaaatgattttatttgcttttatgattgggccgaatgcagattgattcgg
cgaattgatgtaactgttaaaaatctctattgggctgatagtggtgatttagtggctata
gccagtgacacatcattctacattttgaaatacaatcgggacatagtctcttcatactta
gatagcggaagacctgtagatgaacaaggtgttgaagatgcttttgagcttctccatgaa
atgaatgaacgtgtcaggactggtttatgggttggggattgtttcatttacaacaactcc
tcctggagacttaattactgtgttggtggtgaggtaaccacaatgtttcatttagaccga
ccaatgtacttgttgggttatcttgccaatcaaagtcgggtgtatctgatagacaaagag
ttcaatgtaatggggtacacactacttctgagtttgatcgaatataagactcttgtgatg
cgtggagacattgaaagggccaatgaagttctgccgtcaattcctaaagagcaccataac
agtgtggctcgtttcttggaatcacgaggtatgatagaggaagcacttgaagtggctacc
gatcctgattacagatttgaactagccatacagcttggtagattagaaattgcaaaggaa
attgccactgaggtgcaaagtgagtctaaatggaagcagttaggtgaattggctatgtct
gctggaaagttagacatggccgaggaatgtttaaagcatgccatggacctgagtggttta
ttattgctctattcttctcttggagatgctgaaggaatatcaaggcttgcagtccttgct
aaagaacaagggaagaacaatgttgcattcctttgtttattcatgttgggtcgattggaa
gagtgccttgagttactggtggaaagcaatcggatacctgaggctgctttgatggctcga
tcttatcttccaggcaaggtttccgagatagtagctatttggagaaaagacctgagcaag
gttaatccgaaagctgctgagtctttagctgatcctgaagagtatccgaatttgttcgat
gattggcaagttgctctttctgttgaatcaaaagctgcagagacaaggggtgtctatcct
cccgcagaggagtacgtaaaccatgttgataaagcacacatcacccttgtggaggctttc
aggaatatgcaattggaggaagaggaggagcctcttgaaaatggggaagcaagtcatgag
gttcctgaacagaatggtgaagaaaatggggtacaggctgctgaagaacaggatggagaa
gaagggagccaggaggaggctgttgtggtggatgctgattctacggatggtgctgaactc
attaatgggaacgaggctgacgaagagtgggtgcttacaccacgtcactag

DBGET integrated database retrieval system