Malus domestica (apple): 103405892
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Entry
103405892 CDS
T03194
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103405892
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103405892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CHP02642
Motif
Other DBs
NCBI-GeneID:
103405892
NCBI-ProteinID:
XP_070672618
LinkDB
All DBs
Position
17:join(33304802..33304917,33305605..33305722,33305808..33305999,33306119..33306562,33306672..33306773,33306866..33307072,33307416..33307590,33307753..33308021,33308131..33308220,33308405..33308776)
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AA seq
694 aa
AA seq
DB search
MELQGNGGASGDGREASNSRRGNKNYYRHTTEQIRRLEEFFKYCSHPDDNQRQQLSRELR
LEPRQIKFWFQNKRTQTQAQNESADNTVLRKDNERIQWENYAIIKALKSVLCPTCGGPPF
GEEARQLSLQRLQLENAYLKEEHDKVASLLSKYIGKPPSQIESLASVVGSTLDLSCSTNQ
GIIGSPPLNLNLTSPALAYQIQEIPEREKTLMANIAASAMEELVSLFQIGEPLWVKSTAD
GRYFLNRDDYDKLFPKANQFKTSGACVESSKDSGVVAINAATLVDMFLDSNKWEELFPTI
VTKAKTIEVLESGMMKNRSGCLLLMYEQMHILSPLVAPRDFYFLRYCQQIELGTWVIVDV
SHNFPKGSSSNQSQSWRLPSGCMIKDISCGCSRVTWIEHVEVDKQAHRLYRDLICRNVAY
GAERWIVTLKRMCERLDCLMVEVETTCEFGGVVISSEGKRSVMKLSQRMVKNFCGMLSMA
GKIDFPQSSEVNNSGVRVSVRKSTETGQPHGMIVSIATSLWLPLPSQTVFSFFRDERNRV
QWDVLSNGNPVHEIANIPTGTHPGNCISVIRPFTPTENNMLMLQESYTDPLGSLVVYAPV
DMPALNVAVSGKDSSNIPILPSGFVISGDGRAEITGDSGHSKEGGSLLTVAFQILVSSPS
TSKQMNMESVATVNALISSTVQKIKVALNCSSLD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagggaaatggtggagcttcaggtgatggacgtgaagcatcgaattcccgc
agaggcaacaagaattattatcgtcatactacggagcagatacgacgacttgaagaattt
ttcaagtactgctctcacccagatgacaaccaacgtcaacagctgagccgggagttaagg
cttgagccaagacaaatcaagttctggttccaaaacaaaagaacgcagacccaggctcaa
aatgagagcgcagacaacactgttcttcgtaaagacaatgaaaggattcaatgggaaaac
tatgcaatcataaaggccttaaagagtgtcctttgcccaacttgcggtggtccaccattt
ggagaagaagctcggcagctaagtctgcagagacttcagctggaaaatgcctatttgaaa
gaagagcatgataaggtagccagccttctttccaaatacatagggaaaccaccatcacaa
attgaatctctggcgtctgtagttggatcgacgctggatttatcatgttccaccaaccaa
gggattatcggaagtccgccccttaatctcaatcttaccagccctgcattagcttaccaa
atacaagaaatccctgaaagggaaaagacactcatggcgaacattgctgccagtgctatg
gaagaactggtctcactttttcagattggcgagcctttgtgggtcaaatccacagctgat
gggcgatattttctcaaccgtgacgactatgataagttatttcctaaagccaatcaattc
aaaacctctggtgcgtgtgttgagtcttcgaaagattcaggagtagtggccattaatgca
gcaaccttggttgacatgttcttagactctaataaatgggaagaactctttcccacaatc
gttacgaaagcaaagacaattgaagtacttgaaagtggaatgatgaaaaaccggagtggt
tgcctactgctgatgtatgaacaaatgcacattctctcacctttggtggcaccacgggat
ttctactttcttcgttattgtcagcagattgagctaggcacatgggtcattgttgatgtt
tcccacaacttccccaaaggaagttcttcaaatcaatcacaatcttggaggcttccttcg
gggtgtatgatcaaagatatttcatgcggctgctccagggtaacttggattgagcatgtg
gaggttgataaacaagcccatcggctctacagagatcttatatgtagaaatgttgcatat
ggagctgagagatggatcgttactcttaagaggatgtgtgagagattggattgcttgatg
gtcgaagttgaaactacctgtgagtttggaggagtggttatttcgtcagaaggcaagagg
agtgtaatgaagctctctcagagaatggtgaagaacttctgtggaatgctgagcatggca
ggtaaaattgacttccctcagtcgtccgaagtgaacaatagtggggttcgagtctctgtt
cgtaagagcacagaaacaggacagccccatggcatgattgtcagcattgctacttctctt
tggcttcctctaccgtcccaaaccgtctttagcttcttcagagatgagagaaatagagtt
cagtgggatgttctgtcaaatggaaatccagtgcatgagattgcaaacattccaaccgga
acgcatcccggaaactgtatatctgtcattcggcctttcacccctaccgagaataacatg
ctgatgcttcaagagagctacacggaccctttgggatccttagtcgtatatgctccagtc
gacatgccagctcttaacgtagcagtaagtggcaaggactcttccaacatacctatcctc
ccatcggggtttgtgatatcgggcgatggtcgtgctgaaataactggggattcaggacat
tccaaggaaggtggttcacttcttacagtggccttccagatattggtttccagtccctca
acttcaaagcagatgaacatggagtcggtggcaactgtcaacgctctcatcagttccacc
gttcaaaaaatcaaagttgctctcaactgctcgagcttggattaa
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