Malus domestica (apple): 103406558
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Entry
103406558 CDS
T03194
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103406558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103406558
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
103406558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
103406558
NCBI-ProteinID:
XP_028962018
LinkDB
All DBs
Position
07:join(34500523..34500538,34500932..34501242,34501433..34501528,34501625..34501702,34501791..34501967,34502807..34502875,34503009..34503188)
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AA seq
308 aa
AA seq
DB search
MAPPRGRGGSGGFRGGRGDRGGRSGGRSGGGRGFDRGGSGFKSRGRSDRGRGDRGRGRGR
GGMKGGNKVVVEPHRHEGVFIGKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRI
WNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRS
GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIVALNASYFLKA
GGHFVISIKANCIDSTSPAEAVFQSEVKKLQEEQFKPAEQVTLEPFERDHACVVGGYRMP
KKSKAGNA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctcgaggtcgtggtggtagtggtggattcaggggcggtaggggtgacaga
ggtggaagaagtgggggtaggtctggtggtggtagagggtttgacagaggtggtagtggc
tttaaatcccgtgggcgtagtgatcgcggacgtggtgatcgcggaagaggccgtgggaga
ggaggaatgaagggtggtaacaaagtggtggttgagcctcacagacatgaaggtgttttc
attggtaagggtaaagaagatgctcttgttaccaagaatcttgttcccggtgaagctgtc
tacaatgagaagaggatttctgttcagaatgaggatggaacaaaagttgagtataggatt
tggaaccctttccgttccaagttggctgcagccattcttggtggtgttgataatatatgg
attaaacctggtgctaaagttctctacctcggggctgcttctggaactacagtctctcat
gtgtctgacattgttggccctactggagttgtctatgcagttgagttctctcatagaagt
ggcagagacttggtaaatatggctaagaagcgcacaaatgtcatacccattattgaagat
gctagacatccagctaaatatcggatgcttgttggcatggttgatgtgatattctctgat
gttgcacaacctgatcaggctaggattgttgcattgaatgcatcatattttctgaaagct
ggaggccacttcgttatctcaatcaaggccaattgcattgattcaacatcacccgcggaa
gcagtgttccaatcagaggtcaagaagcttcaggaagagcagttcaagcctgcggaacaa
gtcactcttgaaccttttgagcgcgaccatgcttgcgtggttggtggctatcgtatgcca
aagaagtcgaaagctggcaacgcctag
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