Malus domestica (apple): 103406590
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Entry
103406590 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103406590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103406590
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103406590
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GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
103406590
NCBI-ProteinID:
XP_008343800
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All DBs
Position
01:complement(join(31491734..31492087,31492221..31492478,31492604..31492718,31492816..31493105,31493409..31493627,31493754..31494201,31494339..31494419,31494570..31494634))
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AA seq
609 aa
AA seq
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MDPLSSSEITISVERGIIESPSSANPNPAATTGERANPIPLEKLNPTKSVTSPVREWAER
RQPREGIKESWRFGRERAEWIQRRVAIKERWRFGPTFRRLLNPNGEFCQVWSAVLILICG
FAVSVDPLFLYIPIVNIDIKCTRLDRKLKVTALYLRFLTDIFYAYDIIWNVLEDRFNRWR
IIKQWLPIVVLAVAPVPQVVILSFTKIIRLPGSYRMMVNSLLVLQYVVRVGRIYQLREHI
TQDTPIKWFKGVGKFWIRGVFIIFEFILASHVFGALWYFLSFQRLMDCWKYACRNENGCE
LGGFYCEDKDTFMRNVTLLNNLCHANPPTATSFDFGIFLDAIQSGILSSTDFPQKFLHCF
WWGLRNLSSFGQNLQTSSYAWEDLFAILINVIGMLFVLIYLNAIVQMHAQSTAELSKENR
KLREMRNKRNPQIASWLDENGLPLDLKERIMTCALNELKADKDINIITINDILPWKDRVN
IKRRLCLDTLKRATELHNMKEKEFEAFCDYLKPVILEANTYIDPKGEQFEEILLITQGTV
MTCTPTSNRLFHKGDFYREELVRARAFYEGTTSRSTKSVMCCTKVEGFTLTIKDMKRGIE
IIREQKLHR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatccactaagctcctctgagataacgatttccgttgagagagggataattgaaagt
ccgagtagtgcaaatccgaatcctgcggcaactacaggggagcgtgcaaacccgattcct
ttggaaaagttgaatccgacgaagagtgttacgtcccctgtaagagaatgggcagaaagg
agacaaccgagagaagggattaaggaaagctggcgttttggaagagaacgtgcagaatgg
atacaacggagagtagcgattaaggaaaggtggcgttttggaccaacatttagaagactc
ttaaatccgaatggggaattttgtcaagtttggagtgctgtgttgatactaatctgtggg
tttgcggtatcagtggatcctttatttttatacattcctatagtcaacatagacatcaag
tgtaccagattggacagaaagttgaaagttacggctctttatttgcgattcctcacagat
atcttttacgcatatgacattatctggaatgttcttgaggatcgttttaatcgttggagg
attattaagcaatggttgccaattgttgttttggctgttgctcctgttccacaagttgtt
attctctcgttcacaaaaataataaggctcccgggttcttatagaatgatggtgaactct
cttcttgtgctgcaatacgtggtccgggttggacgcatttatcaattgcgtgagcatata
acccaagacactcctataaaatggtttaagggtgttggcaaattctggattcgtggcgtt
ttcataatctttgagttcattcttgctagtcatgttttcggagctctttggtactttctt
tcatttcaacgattgatggattgctggaagtatgcttgtcgaaatgaaaatggttgtgaa
cttggaggtttttattgtgaggacaaggatacattcatgagaaatgtcacgcttctaaat
aatctatgtcatgcaaatccaccaaccgcaacgtcttttgatttcggtatatttcttgat
gccattcaatctggtatcttgagctcaacagattttccacagaaattcttgcactgtttt
tggtggggcttacgaaatttaagctcttttgggcaaaatctccagactagcagctatgca
tgggaagacctctttgcgattcttattaatgttatcggcatgctattcgttttgatatat
ctcaatgcaattgtgcagatgcatgcccagtcgacagctgaattatcaaaggagaacaga
aagttgagggaaatgaggaataagagaaatcctcagatagcatcatggttagatgagaat
ggcctccctttggatttgaaagaaaggatcatgacatgtgcattaaacgaattgaaagcg
gataaagacatcaacataataactatcaacgatattcttccctggaaagatagggttaat
atcaagcgccgtctctgcctagatacactaaaaagagctacggagcttcataatatgaaa
gaaaaggagtttgaagcattctgtgattatcttaagcccgtgattcttgaggcgaacacc
tatattgatccaaagggggaacaatttgaagagatattactcatcacgcaagggacagtg
atgacctgcacacctacaagtaaccggttatttcataaaggtgatttttacagagaagaa
cttgttcgagcacgggcattctatgaagggacgacctctcgctctaccaagagtgttatg
tgctgcacaaaagtcgaagggtttacgcttacgatcaaggacatgaaaagaggcattgaa
ataataagagaacagaaactacaccgttga
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