Malus domestica (apple): 103406675
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Entry
103406675 CDS
T03194
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103406675
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103406675
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
MFS_2
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
103406675
NCBI-ProteinID:
XP_070666542
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Position
02:complement(join(217041..217259,217354..217582,217791..218080,218174..218650))
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AA seq
404 aa
AA seq
DB search
MAYTSSFCGNIHNYCVAAVLLFFSSMSLSQSSNAAAVSYNVMKFGARADGTTDSTQAFVK
AWASACSSGQGNAVMYIPKGRFLLKAVVFRGPCKTGQVTVQIDGTLVAPTDYRALGNSGY
WILFIKVTGLRVLGGSLDARGAAFWACRKSGKSCPVGARSITFNWANSVLVNGLTSINSQ
ATHLVVNSCNNVVVRNVKLIAPSESPNTDGIHVQSSTGVTITGSILQTGDDCIAIGPGTR
NLHMSNIKCGPGHGVSIGSLGRNLKEDGVQNVTLTNAVFSGSDNGVRIKSWARPSTGFVR
NIIFQNIVMRNVKNPIIIDQSYCPHNQGCPSKSSGVTISQVTYRNIQGTSRTAEAVTFDC
SPSTPCTGIRLQDIKLTYLNKVATSSCKNIRGTSTGLLMPDPCI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttatacatcaagcttctgcggcaatattcataattattgtgtagcagctgtactg
ctgtttttctcgagcatgtcgttgtcgcagtcatccaacgcagcggcagttagctacaat
gtgatgaagtttggtgcacgagcagatgggacgacggactcgacgcaagcattcgtcaag
gcatgggcgtcggcgtgcagctccggccagggcaatgctgtcatgtacatccccaaagga
aggttcttgttgaaggctgtggtgtttagaggtccatgcaagaccggacaagttacagtt
caaatagacggaacccttgtagcccccacagactatagggctttgggaaactcaggctac
tggattttattcattaaggttaccggacttagggtcctcggtggttccctcgacgccagg
ggggctgcattttgggcttgcaggaaatccggcaagagttgtcctgttggagctaggtct
ataacgttcaactgggcaaacagcgttctggtaaatggcttaacatcgatcaacagtcag
gcaacccaccttgtagtcaacagctgcaacaatgtggtcgttcgaaacgtgaagctgatc
gctccgagcgaaagccccaacacagatggtattcatgtgcagagctctaccggtgtcacc
ataaccggcagcatcttgcaaaccggtgacgattgcatagcaatcggtcccggcaccaga
aacctccatatgagcaacatcaagtgtggtccaggccatggtgtaagcattggaagccta
ggcaggaatctcaaggaagatggtgtccaaaatgtaaccctaacgaatgcagtgttcagt
ggatcagacaatggagtacgaataaagtcatgggccaggcccagcactggcttcgttagg
aacataatcttccaaaacatcgtcatgagaaacgtgaaaaaccccatcatcattgaccag
agctattgcccccataaccaaggctgtccttctaagagttcaggtgtgacgatcagtcaa
gtgacgtacagaaacatacaagggacgtcgcgaacggcagaggcagtaacgttcgactgc
agccctagcactccatgtactgggatcagattgcaagatatcaagcttacgtatctgaat
aaggttgccacgtcatcgtgcaaaaacattaggggaaccagcactggactgcttatgcca
gatccttgcatatag
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