Malus domestica (apple): 103406958
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Entry
103406958 CDS
T03194
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103406958
03041 Spliceosome [BR:
mdm03041
]
103406958
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103406958
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103406958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
103406958
NCBI-ProteinID:
XP_028945020
LinkDB
All DBs
Position
02:join(7315843..7315923,7316819..7316880,7317215..7317317,7317528..7317604,7317684..7317745,7317852..7317939,7318288..7318363,7318457..7318487,7318611..7318730,7319129..7319214,7319671..7319844,7320143..7320421)
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AA seq
412 aa
AA seq
DB search
MQQQRFKQQAMMQQSLYQHPALLGAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LMQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYA
SSQREDTSGHFNIFVGDLSPEVTDATLFACFSGYSSCSDARVMWDQKTGRSRGFGFVSFR
NQQEAQSAINDLNGKWLGSRQIRCNWATKGATSSDDKQSTDSKSVVELTNGTSDDGQEKP
NEDAPENNPQYTTVYVGNLSPEVTSADLHRHFHGLGAGVIEDVRVQRDKGFGFVRYSTHS
EAAVAIQLGNARFLCGKPIKCSWGSKPTPPGTSSTPLPPPAAVHIPGFSAADLVAYERQL
ALSKMGGAQALMLPQGQHALKAAMGLGAGASQAIYDGGYHNVATTQQLMYYQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagaggttcaagcagcaagccatgatgcagcagtcgctataccaacaccct
gccctcttaggggcccctcagatagagcctatcttgagtggaaatctgcctcctgggttt
gattcaagtacttgccgcagcgtttatgttggaaatattcacccacaagttaccgaaccc
cttatgcaagaagtttttgccagtactggtccacttgaaggatgcaagctcataaggaag
gataagtcatcctatggatttgttgactactttgatcgtaggtcagctgctcttgctatt
gtgacccttaatggcaggcatctatttgggcagccgattaaagttaattgggcatatgca
agtagtcagagagaggatacatcaggtcattttaatatttttgttggtgatcttagccct
gaggttactgatgctacactgtttgcatgcttttctggttattccagttgttcagatgct
agagttatgtgggatcagaaaactgggcgttcaaggggctttgggtttgtttctttccga
aatcagcaggaggcccaaagtgcaattaatgacttaaatggaaagtggcttggaagtaga
cagattcggtgcaattgggccacaaagggtgctacttccagtgatgacaagcagagtact
gattctaaaagtgttgtagagctgacgaatggaacgtcagacgatggtcaggagaagcct
aatgaagatgctccagagaacaatcctcagtatactacagtttatgtgggcaatctatct
cccgaggttacttcagctgacctccatcgtcatttccatggccttggtgccggagttatt
gaagatgttcgggtgcagcgagataaaggttttgggtttgtgagatacagtacgcattct
gaagcagctgtggctatccagttggggaatgctaggtttctgtgtggcaaaccgattaag
tgttcatggggcagcaagcctactccaccagggacaagctcgacccccctgccgccacca
gctgcagttcacattccaggtttctcagccgccgaccttgtggcctatgaaagacaactg
gcattgagcaaaatgggtggcgcccaagccctcatgcttccgcagggtcagcatgcactg
aaggcagccatggggttgggtgctggagctagtcaggccatatacgacggtggctaccat
aatgtagcaacaactcagcaactcatgtactaccagtaa
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integrated database retrieval system
