Malus domestica (apple): 103407795
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Entry
103407795 CDS
T03194
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K10752
histone-binding protein RBBP4
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
mdm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103407795 (MSI1)
03083 Polycomb repressive complex
103407795 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103407795 (MSI1)
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103407795 (MSI1)
Histone modification proteins
HAT complexes
HATB complex
103407795 (MSI1)
HDAC complexes
Sin3A-HDAC complex
103407795 (MSI1)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103407795 (MSI1)
PRC2.2
103407795 (MSI1)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103407795 (MSI1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103407795 (MSI1)
Chromatin remodeling factors
NuRD complex
103407795 (MSI1)
NuRF complex
103407795 (MSI1)
NuRF complex (fruit fly)
103407795 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_HPS5
NBCH_WD40
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
103407795
NCBI-ProteinID:
NP_001280972
UniProt:
G8CVM4
LinkDB
All DBs
Position
02:complement(join(27602519..27602741,27603622..27603717,27603823..27603947,27604827..27604979,27605208..27605534,27606197..27606541))
Genome browser
AA seq
422 aa
AA seq
DB search
MGKDDEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPXDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATXKNKTLEXMQIFKVHEGVVEDVAWHLRHE
NLFGSVGDDQYLLVWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagacgacgaagaaatgaggggagagatagaggagcggctgataaacgaggag
tacaagatatggaagaagaacacaccgtttttgtacgatctggtcataacccatgcccta
gaatggccttcacttacggtggagtggcttcccgaccgagaagagcctccggggaaggac
tattcggtgcagaagatgattttggggactcacacctccgagaacgagccgaattacctt
atgctcgctcaggtccagctgccattggaggatgccgagaacgatgctcgccattatgac
gatgatcgagctgaggttggcggttttggttgcgccaatggaaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgatatatgcctcagaatccatttatt
attgccacaaagaccgttaatgctgaagtttttgtgttcgattatagcaaacatccatcg
aagcctccattggatggtgcatgcagtcctgatttgaggctgaggggccacagcactgaa
ggatatggtttatcgtggagtaagttcaagcagggtcatttactcagtggttcggatgat
gctcagatatgcctgtgggacattaatgcgactgctaagaacaaaactcttgaagctatg
cagatatttaaggttcatgaaggtgtagtggaagatgtagcatggcatttgaggcatgaa
tacttatttggttcagttggtgatgatcaataccttctcatatgggatctccggactcca
tcagttaccaagcctgtccaatctgtggttgctcatcagagtgaggttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatctactgacaaaactgttaagctg
tttgatctacgcaaaatcaatactgcactccacacctttgattgccataaggaggaggtt
ttccaagtcggttggaatccaaagaatgaaacaatcttagcttcttgttgtcttggtagg
agactcatggtttgggatcttagcagaattgatgaagagcagacaccagaggatgcagaa
gacggccccccagagttactttttattcatgggggtcacaccagtaaaatatctgatttt
tcgtggaacccgtgtgaagattgggttatttctagcgttgctgaagataatatactccag
atttggcagatggcagagaacatttaccatgacgaagatgatttacccgaagaaccggca
aagccttag
DBGET
integrated database retrieval system
