Malus domestica (apple): 103407802
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Entry
103407802 CDS
T03194
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103407802
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103407802
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
AAA_22
MMR_HSR1
AAA_15
RsgA_GTPase
AAA_16
AAA_28
AAA_27
VapE-like_dom
DUF5906
AAA_30
AAA_24
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
103407802
NCBI-ProteinID:
XP_028954282
LinkDB
All DBs
Position
03:complement(join(11569997..11571054,11572108..11572342,11572546..11572756,11572892..11572965,11573694..11573909))
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKSPAAENGADKLANGVGAMHISDRNCTG
VLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGLRE
LPIPDHMDIYHLSSEIEASDMSSLEAVISCDEERMRLEKEVEELAAQDDGGGEQLERIYE
RLEALDAATAEKRAAEILYGLGFDKKMQAKKTRDFSGGWRMRIALARALFINPTILLLDE
PTNHLDLEACVWLEEMLKNFERILVVISHSQDFLNGVCTNIIHMQNKKLKMYTGNYDQYV
QTRSELEENQMKQYKWEQEQIANMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VARDKILIFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAG
KSTLLKLMTGELFPSDGMVRRHNHLRIAQFHQHLAEKLDVELSALAYMIKEYPGNEEEKM
RAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPQLLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWGGDIMDFKQHLKIKAGLAD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacgcgagcaagaagaaggcggcccagaagaaggcggcggcggcggccaag
agaggtgggaaggcggcggcggcagctgcttcgtccaagtcgcctgcggccgagaacggt
gctgataagcttgccaatggagtcggggcgatgcatatttcagatcggaactgcaccggc
gtgctctgctcgcatccactttctagagatattcgcattgagtctctgtcagttaccttc
catggacatgatctgatagtcgattctgaactggagcttaattatggaagacgctatggt
ttgcttgggttgaatgggtgtggtaaatccaccctcctaactgcaatagggctccgagag
cttccaattccggatcacatggatatctatcatctcagtagcgagattgaagcctcagac
atgtcttcacttgaggctgtcattagctgcgatgaggagaggatgaggttggagaaagaa
gttgaagaactggcagctcaggatgatggcggtggagagcagcttgaacgcatttatgag
cgccttgaagcattggatgcagcaactgctgagaagcgtgctgctgaaattctttatggt
cttgggtttgacaagaagatgcaagcaaagaaaactcgggatttttctggtgggtggaga
atgaggatcgcacttgcacgtgctctctttataaacccaaccatcctgttactggatgag
cccacgaatcatcttgatctagaagcttgtgtgtggttggaggagatgttgaagaatttt
gagcgcatcctggttgttatttcacactcccaggattttttgaacggtgtctgcacaaac
atcattcacatgcagaacaagaaactgaagatgtacactggaaactatgatcagtatgtt
cagacccgttcggaactggaggagaaccagatgaaacagtataagtgggagcaggaacag
attgctaacatgaaggaatatatcgctcggtttggacatgggtcagcaaaactagctcgc
caggcacaaagcaaagagaaaaccctagcaaaaatggagcgtggtgggcttacagagaag
gtggcaagagacaagattttaatcttccgttttgtcgatgtgggaaagctgcctccacca
gtgcttcagtttgttgaagtctcatttggttacactcctgataatttgatctacaagaac
attgactttggtgttgatctggactcacgtatagctctggttgggccgaatggagctgga
aagagtaccctcttgaagctgatgacgggggagttgtttccttctgatggcatggtccgg
cggcacaatcaccttagaattgcccagttccatcagcacttggctgagaagcttgatgtg
gaactgtctgccctagcgtacatgatcaaagagtacccgggaaacgaggaagagaagatg
agggctgcaattggtaagtttggattatcgggtaaggcacaggtaatgccaatgaagaac
ttatctgacgggcagaggagccgtgtgatctttgcttggttggcgtttaggcagccccag
ttactgttgttggatgagccgaccaatcatttagatattgagacaattgactctctggcg
gaggcgttgaatgagtgggacgggggcctggttcttgttagccacgatttcaggctcatt
aaccaggtagctcaggagatatgggtatgtgaaaatcaagccgtgacccggtggggtggc
gatattatggacttcaagcagcacctgaagataaaggctggtttagccgactga
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