Malus domestica (apple): 103408162
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Entry
103408162 CDS
T03194
Name
(RefSeq) exopolygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103408162
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103408162
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
103408162
NCBI-ProteinID:
XP_028956273
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Position
03:join(37203662..37204009,37204110..37204427,37204526..37205179,37205277..37205315,37205446..37205706)
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AA seq
539 aa
AA seq
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MGLRSPNMGGVARRTSAMAVFLLGFALLSCVAQAASRGHLFRAGARRSETTKRKVFDVTA
FGAKTEDQMNRGSKKPNVVGKLSTGELPGGGIPGLPGGTEEESYDDGEKIDDPNGLAFIR
TWVAACRGNYKGPTKVVIPKGTFLTGPVVFQGPCNSSTEPIVVEVQGYVKASTDLSQYSS
PEWFSFELVDGLIVTGDGTFDGQGTWTTSGSKDSNKAAQAPSSFKFNKVNNSLIERITSL
NSKLFHTHMFGCNNMTMRNVHLTAPGDSPNTDGVYISASNHIKVLNSVIATGGDCVSIGQ
GAYDVTVKNITCGPGYGISIGSLGKDPDELSVSEIHVSNCTLRNTTYGARIKTSAGKSAG
EVTGIVFEDIIMDQVQNPIIIDQYYGNTKVVKKIIDGNKKMAVPGNKKSVGAGLKKKVGA
GLKKKVGAGSKKKVGVGKQMELQGGKKKSVSKNDGAGVPSRPVSKWKISDVHFRNIRGTS
AGKVAVSLACSSVNPCEGVKFTDINLSYKGTSKKNTALKSECFNAQITPKGVQNPPLCR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggattgaggtcaccaaatatggggggcgttgcaagaagaacatcagccatggctgtg
tttcttctcggcttcgctttgctctcttgcgtggcccaagctgcatcccgtggacatctt
ttcagggctggtgcccgtcgtagcgagactaccaagaggaaagtgtttgatgtcacagcc
ttcggtgctaagaccgaagaccagatgaatagaggaagcaagaagcctaatgttgttggc
aagttgagtactggggaactgcccggtggaggtatacctggcctccctggtggtactgag
gaggagagttatgatgatggcgagaaaattgatgatcctaatggattggcattcatccgg
acatgggtagccgcatgcagaggaaactacaagggtccaactaaggttgtgatccccaaa
ggaacattcttgacaggacctgtggtgttccaagggccatgcaacagctcaactgagccc
atcgtcgttgaagttcaaggatatgtcaaagccagcaccgatctcagtcaatactcctcg
cccgagtggttttcatttgagttggttgacggcttgatcgtcacgggtgacggcactttt
gacgggcaaggtacatggacaaccagtggcagcaaggactccaacaaagctgctcaagcc
ccatcctcatttaaattcaacaaagtgaacaacagcctgatcgaaaggatcacatcctta
aatagcaaactcttccacacacacatgttcggctgcaacaacatgacaatgaggaatgtc
cacctcactgctcctggagatagccctaacacagatggcgtgtacatcagcgcttcgaac
cacatcaaggtgcttaacagtgttatcgcaaccgggggtgactgcgtttccatcgggcaa
ggcgcttacgatgtcaccgttaaaaacatcacgtgtggtccagggtatggcatcagtatc
gggagcctcggaaaggaccctgacgaactgagcgtcagtgagattcacgtcagcaattgc
acattgagaaacaccacctatggtgccagaatcaagacttcggctggcaaaagtgcagga
gaagtgaccggaatcgtcttcgaagacattatcatggaccaagttcaaaaccctattatt
atagatcagtactacggtaacacgaaggtggtaaaaaaaatcatcgatggaaataaaaag
atggcagtccccggaaataaaaagagcgtaggagctggattaaaaaagaaggtaggagct
ggattaaaaaagaaggtaggagctggatcaaaaaagaaggttggagtaggaaaacagatg
gaactgcaaggtggaaagaaaaagagcgtaagtaagaacgatggagctggggtaccttct
aggccagtatcaaagtggaagatcagtgacgttcacttcagaaacattaggggcacctca
gccggaaaggttgccgtttcgttagcttgcagctctgtaaacccatgcgagggtgttaag
ttcaccgacattaacctttcctacaagggcaccagtaagaaaaatacggcgcttaaatct
gaatgtttcaacgcccagattacaccaaagggcgtacaaaacccaccactctgccgttaa
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