Malus domestica (apple): 103408270
Help
Entry
103408270 CDS
T03194
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
mdm
Malus domestica (apple)
Pathway
mdm03030
DNA replication
mdm03410
Base excision repair
mdm03420
Nucleotide excision repair
mdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103408270
03410 Base excision repair
103408270
03420 Nucleotide excision repair
103408270
03430 Mismatch repair
103408270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdm03032
]
103408270
03036 Chromosome and associated proteins [BR:
mdm03036
]
103408270
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103408270
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103408270
DNA Replication Termination Factors
ELG1-RFC complex
103408270
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103408270
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103408270
Check point factors
HRAD17(Rad24)-RFC complex
103408270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Rad17
Mg_chelatase
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_24
AAA_5
AAA_11
RuvB_N
nSTAND3
AAA_assoc_2
AAA_25
AAA_19
AAA_28
ABC_tran
AAA_30
DNAX_ATPase_lid
MeaB
bpMoxR
RNA_helicase
AAA_18
KTI12
DO-GTPase1
IstB_IS21
NTPase_1
AAA_3
AAA_7
FtsK_SpoIIIE
SLFN-g3_helicase
SRP54
Motif
Other DBs
NCBI-GeneID:
103408270
NCBI-ProteinID:
XP_028956843
LinkDB
All DBs
Position
04:join(8553445..8553597,8554669..8554775,8554865..8554966,8555228..8555423,8556219..8556347,8556430..8556624,8556713..8556823)
Genome browser
AA seq
330 aa
AA seq
DB search
MASSSSSSAYDMPWVEKYRPTKVADIVGNEDAVSRIQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKVVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDEEILGRLMI
VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVK
NMVRNILEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAH
MRICDGVGSYLQMCGLLAKLSLVRETAKET
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcttcttcgtcagcctacgacatgccgtgggtggagaagtacaggccc
accaaggtcgccgacattgtgggcaatgaagacgccgtgtccagaatccaggtcatcgct
cgcgacggcaacatgcccaacctcatcttagccggtcctcctggaactggtaagaccact
agcatactggctcttgcacatgagcttttgggaccaaactataaggaggctgttttagag
ctgaatgcatcagatgacaggggaatcgatgttgtgaggaacaaaattaaaatgtttgct
caaaagaaagttacactgccttccggacgccataaagttgtcatcttggatgaagctgac
agcatgacatctggagcacaacaagctctgaggcgaacaatggaaatatattcaaattcc
actcgtttcgctcttgcgtgcaatacatcttccaaaatcattgagcctattcagagtaga
tgtgcccttgtccggttttctagattgactgatgaggagatacttggtcgcctaatgata
gtggttcaagctgagaaggttccatatgttccagaaggtcttgaagcgattattttcacc
gctgatggtgatatgaggcaggcactgaataacttgcaagctacaaacagtggattccgg
tttgtgaaccaagaaaatgttttcaaggtctgtgaccagcctcatccgttgcatgtaaag
aatatggtgcgcaacatactggaagggaaatttgatgatgcttgttcgggtctcaagcag
ctctacgatctgggttactccccaacggacataatcacaacttttttccgtatcataaaa
aactatgatatggctgagtttttgaaactggagttcatgaaggaaactggatttgctcac
atgagaatctgtgatggagttggctcgtaccttcagatgtgtggtcttctggctaagctt
tccctagtccgtgaaaccgcgaaggaaacataa
DBGET
integrated database retrieval system
