Malus domestica (apple): 103409642
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Entry
103409642 CDS
T03194
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mdm
Malus domestica (apple)
Pathway
mdm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103409642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103409642
03036 Chromosome and associated proteins [BR:
mdm03036
]
103409642
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103409642
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103409642
PBAF complex
103409642
GBAF(ncBAF) complex
103409642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103409642
NCBI-ProteinID:
XP_008346671
LinkDB
All DBs
Position
14:join(23945713..23945800,23946008..23946555,23946652..23947146,23947398..23947567,23947684..23947730,23947989..23948152,23948267..23948446)
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AA seq
563 aa
AA seq
DB search
MELAPHNPGSNPLRPDEPELELYSIPRHSSWFLWDEIHETERIALKEYFDGSSISRTPKT
YKEYRDFIINKYREDPSRKLTFTEVRKSLVGDVTLLHKVFNFLEKWGLINFGANSGGGGG
FVAGGDERCKVKVEDGVPNGIRVAAMPNSIKPISQVSGQPKVGEVGGGGGVSRVGFPPLA
SYSNIFGDLKKEGLVCGNCGGHCDSGHYKYSKGDFLICVKCFESGNYGENKLRDDFKFNE
AVENSRINGVEWTESETLLLLESVFKYGDDWELVAQNVQTKTKFDCIAKLIDLPFGELVL
GSAYRKDNSNGFSANLDSTKQVQLSSTGCQETIITKGQLHEQTDDGKQNGDTLSEGPPLK
RQRIASLSDASTSLIEQVAAISTMVGPQITAAAADAAVNVICEETSCSREIFDTDDDSLT
NGVWSPAKNYETERVQDGDLEMKEKPTGSESQDALFRKDDIPPTLQIKAAIGTTLGAAAA
HSKLLADQEDRQIEYLMATIIGTQMKKLHFKLDYVKDLEQIMKKEHAQIEDAEDFLVQER
INVLQRTFDSSVPRWRGHPAMKS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgctccacacaacccgggttctaatccgctccgacccgacgaaccagagctc
gaactctactcaatcccacgccactctagctggtttctgtgggatgagattcatgaaact
gagagaattgcgttgaaagagtattttgatgggagctcgatatcgagaacgccgaaaacg
tacaaggaatacagggattttatcattaataagtacagggaagatccttctaggaagctt
acattcactgaggttagaaagtcgcttgtgggtgatgttactttgcttcataaggtgttt
aatttcttggagaagtgggggttgattaatttcggtgcgaattcaggtggtggagggggt
tttgttgctgggggtgatgagaggtgtaaggttaaggttgaggatggagttcccaatggg
atccgggtggctgcaatgccgaattccattaaacccatttcgcaggtttcgggtcaacct
aaagttggggaggttgggggtggtggaggtgtgagtagagttgggtttcctccgttggca
tcatactctaatatttttggtgatttgaagaaggaggggttggtttgtggaaactgtggt
ggacattgcgattctggacactacaagtatagcaagggtgattttctgatttgcgtaaag
tgttttgaaagtggaaactatggggagaacaaattaagggatgatttcaagttcaacgag
gcagttgaaaatagcaggattaatggagttgaatggactgaatcagaaaccctattactt
ttagaatctgttttcaagtatggggatgattgggagcttgttgctcaaaatgttcagacc
aagaccaaatttgattgtattgctaagctcattgatctgccttttggggagcttgtattg
ggttctgcttacagaaaagacaattctaatggctttagtgctaatttggactctacgaag
caagttcagttatcttcaacagggtgtcaagagactatcataaccaagggtcagttgcat
gagcagacagatgatggcaagcagaacggagacactttgagtgaaggtccacctttgaaa
agacagcgcattgcttctctttcggatgctagtacatctctgattgaacaggtagctgcc
atatcaaccatggttggtccacaaatcacagctgccgcagctgatgcggccgttaatgtg
atttgtgaggaaacctcatgttcaagggagatatttgatactgatgacgattctcttact
aatggcgtgtggtctcctgctaaaaactatgagacagagagagtccaagacggggatttg
gaaatgaaggaaaagccaaccggatcagagagtcaggatgcactcttcagaaaagatgac
atacctccaactttgcaaattaaagctgccattggaacaactctcggagcagctgccgct
cactcaaaattattggctgatcaggaggatagacagattgaatatctaatggcaaccata
attgggacacagatgaaaaagctgcacttcaaactggattacgtcaaagatctggagcaa
atcatgaagaaggaacacgctcaaattgaagacgcagaagattttctcgtacaagagcgg
attaatgtcttgcaaagaacattcgactccagtgtacctagatggaggggtcatcccgct
atgaaatcttga
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