Malus domestica (apple): 103409907
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Entry
103409907 CDS
T03194
Name
(RefSeq) cysteine protease ATG4-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103409907
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103409907
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103409907
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103409907
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103409907
Membrane trafficking [BR:
mdm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103409907
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103409907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Rap1-DNA-bind
Motif
Other DBs
NCBI-GeneID:
103409907
NCBI-ProteinID:
XP_028960819
LinkDB
All DBs
Position
07:join(76681..77140,77222..77307,77625..77675,77828..78207,78657..78795,80718..80773,80843..80913,81011..81231)
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AA seq
487 aa
AA seq
DB search
MKDFCETAVASKYSSKSSTDSTDRGSSSACSDSGSRDSKHNKASLWSNFFESAFSIFETH
SESSITDKKESHSRNNGWTAAVRKAVSSGSMRRIQEHVLGSSRIGISSASDIWLLGVCYK
VSQDDSSGDAPINNGLGAFEQDFSSRILMTYRKGFEAIGNSKYTSDVNWGCMLRSSQMLV
AQALLFHRLGRSWTRPLHKPLDEAYIGILYHFGDSETSTFSIHNLLQAGRAYDLAAGSWV
GPYAMCRTWETLVRCRREATDLDDQPLPMAVYIVSGDEDGERGGAPVVCIEDASRHCLEF
SRGQVDWTPILLLVPLVLGLEKVNPRYIPSLRATFTFPQSLGIMGGKPGASTYIIGVQDE
KALYLDPHEVQPVINIRRDDLEADTLSYHCNVIRHIPLDLIDPSLAIGFYCRDRDDFNDF
CFRASKLADESNGAPLFTVTQTHSVPRPVNHSDALGDSGAVENDDSFSVLPMSDADGSAQ
EDEWQLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttttgtgagacggctgttgcgtcgaaatattcttctaaaagttcaacagat
tcaacagatagaggttcatcatctgcttgttcagattcaggatctagggacagtaagcac
aataaggcatccctgtggtcaaacttctttgagtccgctttctcaatcttcgaaacacat
agtgagtcatcaattactgacaagaaggaaagtcactctagaaacaatggatggacagca
gctgtgaggaaagctgtgagtagtgggtctatgaggagaattcaagagcatgtacttgga
tccagcaggattggaatttcttctgctagtgacatatggcttcttggtgtgtgctataag
gtctcacaagatgattcctccggagatgcacctattaataatggcttaggagcatttgaa
caggatttctcatcaagaattttgatgacatatcgtaaaggatttgaggctattggaaat
tcaaagtacactagtgatgtaaattggggttgcatgcttcggagtagtcagatgcttgta
gcccaggcattgcttttccatagattgggaagatcttggacaaggcccttgcacaagcct
ttagatgaagcatatattgggatcttgtatcatttcggtgattccgaaacatcaactttc
tccatccacaatcttcttcaggctggaagggcttatgacctcgctgccggatcatgggtt
ggcccatatgccatgtgccgcacttgggagactctagtacgatgtaggagagaagcaact
gaccttgatgatcagccacttccaatggctgtttatattgtttctggggacgaagatggg
gagcgaggtggagccccggtagtctgcattgaagatgcttctagacactgtttggagttc
tcaagaggccaagttgattggacgcctattcttttattggttcctttggttcttggactt
gaaaaagtcaaccccaggtacattccatcgttgcgggcgacattcacctttccccaaagt
cttggcatcatgggtggaaaacctggtgcgtcaacttacattattggtgtgcaggatgaa
aaagcactttaccttgatccccatgaagttcagccggtaatcaatataagaagggatgat
ttggaggctgatactttgtcttaccactgcaatgttatacggcacattccccttgatttg
attgatccatccttggcgattggattttattgtcgtgacagagatgattttaatgatttt
tgttttcgagcctccaagctggcagatgaatcaaatggtgctccactgtttactgtgact
cagacacatagtgttcccaggccggttaaccacagtgatgcgttgggtgatagtggtgca
gttgaaaacgatgattcattttctgttctgcccatgagcgatgcggatggaagtgcacaa
gaagatgaatggcaactcctatga
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integrated database retrieval system
