Malus domestica (apple): 103410224
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Entry
103410224 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 4
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103410224
Membrane trafficking [BR:
mdm04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
103410224
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COG4_m
COG4_C
PPR_1
PPR_2
PPR
COG4_N
PPR_3
PPR_long
RINT1_TIP1
Sec10_HB
ZW10_C2
ECSIT_N
Motif
Other DBs
NCBI-GeneID:
103410224
NCBI-ProteinID:
XP_008347188
LinkDB
All DBs
Position
07:complement(join(23514669..23515298,23516255..23517826,23521131..23522414))
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AA seq
1162 aa
AA seq
DB search
MHLLFRRSTKTATRSFALLPKTPPSSSSSHSTKPHHDIGSPSRVQKLIASQSDPLLAKEI
FDYAARHSYASYFTLILKLGRSKYFSLVDDLLLLFESQNYTVSPTLFSYLIRIYGEAXQP
QKPLRVFYTMVEFDCRPSVKHLNRILHILVSHRNFLRPAFDVFKDAHRHGLTANTESYNI
LMRAFCLHGYLSIAYQLFKKMFERDLXCRNGQVNTAVDFLEDMLNKGFVPDTLSYTTLLN
SLCRKKKLREAYRLLCRMKVKGCNPDIVHYNTVILGFCREGRPGDACKVLEDMASNGCLP
NLVSYRTLVSGLCDHGMLDEAKSLETMVSKGFSPHFSVIHALVKGFCNVGTFEEACGVLE
EVLNHGEVPHMDIWITVVPGICEEIELVRMEEILREVMKVEIRPNTRIVEAAFGLEDYLI
IKIQANPRRAMESDQPSIKFGTQEALSHVRALTDVGAMTRLLHECIAYQRSLDLDLDNLL
SQRSDLDKQLLALRKSSQVLDIVKADSDHVLSNVTSTCDLADNVSAKVRELDLAQSRVKS
TLLRLDAIVERGNCIDGVKQALDAQDYEAAANYVQRFLQIDSEYRDSGADQREQLMESKR
QLESIVRKKLSAAVDQREHSNVLRFIRLYTPLGLETEGLQVYVGYLRKVIGMRSRLEFEH
LVELMEQNNPTQAVNFVGCLTNLFKDIVLAVEENDEILRGLCGEDGVVYAICELQEECDT
RGSLILKKYMDYRKLPKLSSEINAQNKNLLNVGGVGVGSEGPDPREVELFLEEILSLMQL
GEDYTEFMVSKIKGLTNVDPDLGPRATKAFRSGSFNKVVQDITGFYVILEGFFMVENVRK
AIRIDEHVPDSLTTSMVDDVFYVLQSCLRRAISTLNISSVIAVLSGASSLLSNEYHEALQ
ERMREPNLGAKLFLGGVGVQKTGTEIATVLNNMDVSSEYVLKLKHEIEEQCLEVFPAPVD
REKVKSCLSELGDMSNTFKQALNAGLEQLVATVTPRIRPVLDNVATISYELSEAEYADNE
VNDPWVQRLLHAVETNVAWLQPLMTANNYDSFVHFVIEFIVKRLEVIMMQKRFSQLGGLQ
LDRDARALVSHFSGMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPA
EVRRVLGLRVDFKPEAISALKL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcatctactctttcggcgctcaacaaaaaccgccactcgctccttcgccctcctgcca
aaaaccccaccctcctcctcctcctcccactccaccaaaccccatcacgatatcggctct
ccttccagagtccaaaagctcatcgcctcccaatccgaccctctcctcgccaaagagatc
ttcgactacgccgcccgccactcctacgcctcctacttcactctcatcctcaagcttggc
cggtccaagtacttctccctcgtcgacgacctccttcttctcttcgagtcccaaaactac
actgtttccccgaccctattttcctacctgatcagaatctacggcgaagcgatcagcccc
agaagccccttcgagtgttctatactatggtggagttcgactgcaggccttccgtcaaac
acctgaaccgcattcttcatattctcgtttctcaccggaactttctccggccggcgttcg
acgtcttcaaggacgctcatcgtcatgggctgacggccaatacggaatcatacaatatat
taatgcgtgccttttgtttgcacgggtatctcagcattgcctaccaactgttcaagaaaa
tgtttgagagagaccttgtgtaggaatgggcaggtgaataccgcggtcgatttcttggag
gacatgttgaacaaagggttcgtgccggatacgctgagttacacgacattgttgaatagt
ttgtgtaggaagaagaagcttcgtgaggcgtataggctgctttgtaggatgaaggttaag
ggttgcaatcctgatattgtgcattataacactgttatattggggttctgtagagagggg
cgtccgggggatgcttgtaaggttctcgaggacatggcgtcaaatgggtgcttgccaaat
ttggtatcttatcggaccttggttagtgggttatgcgatcatgggatgcttgacgaggct
aagagtttggagacaatggtatcaaaggggttttctccgcatttctcagttattcatgct
ttggttaaagggttctgtaatgtgggtacgtttgaggaagcttgtggagttttggaggag
gtgctaaaccacggggaagttcctcatatggatatttggattacggtagttcctgggata
tgcgaagagatagagctggtgagaatggaggaaattctgagagaggtaatgaaggtggaa
attaggccaaacactagaattgtggaggcagcgtttggtttggaggattacttgatcata
aagatacaggctaaccctaggagagcaatggaatcggatcaaccatccattaagttcggg
acccaagaggccctctctcacgtgcgagccctgacggacgtcggcgccatgacgcgcctc
ctccacgagtgcatcgcctaccagcgatccctagatctggacctcgacaacctcctctcc
cagcgctccgacctcgacaagcagctcctcgccctccgcaagtcctcccaggttctcgac
atcgtaaaggccgactccgaccacgtcctctccaacgtcacctccacctgcgacctcgcc
gacaacgtcagcgccaaggtccgcgagctcgatctcgcccagtcccgcgtcaaatccacg
ctcctccgcctagacgccatcgtcgagcgcggcaactgtatcgatggcgtgaagcaggcc
ctcgacgcccaggactacgaggcagccgccaattacgtccagcgcttcctccagatcgac
tccgagtaccgggattccggcgccgaccagcgggagcagctcatggaatcgaagcggcag
ctcgaatccatcgtcaggaagaagctctcggcggcggttgaccagagggagcattccaat
gtattgagattcatcaggctctacactccgttagggttagaaacggagggtttgcaggtt
tacgttgggtacttgcggaaagtgattgggatgcgatcccggctcgaattcgagcacttg
gtggagctaatggagcagaacaatccgacccaggcggtcaattttgttgggtgtttgacc
aatttgttcaaggacatagttttggcggtggaagagaacgatgaaattctgagagggctt
tgtggtgaagacggagttgtttacgccatttgtgagcttcaagaggagtgcgatacgagg
ggtagtttgatcttgaagaagtacatggactataggaaattgcctaagttaagctccgag
atcaatgcccagaacaagaatttgctcaatgtgggtggcgttggtgttgggtcagaggga
cccgacccgagagaggttgaactgttcttggaggagatattgtctttgatgcagttgggt
gaggattacactgagttcatggtgtctaagatcaagggcttgacgaatgttgacccggat
ttaggtccacgagccactaaggcttttaggagtggaagttttaacaaggtggttcaggac
attaccgggttttatgtcatattagaaggtttctttatggtggagaatgtgaggaaggct
ataaggatcgatgaacatgtgcctgacagtctcacgacttcaatggtggacgacgtgttc
tatgttttgcagagttgcttgcggagggcaatatccactttgaatatcagctcagtgatt
gctgtgttgagtggtgcgagtagtttgttgagcaatgagtatcacgaggctttgcaagag
aggatgagagagccaaatcttggcgcaaagctgttcctaggtggtgttggggtgcaaaaa
actgggacggagattgccacggttttgaataatatggatgtcagtagcgagtacgtcctc
aaactaaagcacgagattgaggagcaatgcttagaggtgtttcctgcaccagttgataga
gaaaaggtcaagtcttgcctgtccgagctaggggatatgagcaacacattcaagcaagcg
ttgaatgctggcttggaacaacttgtggctactgtgacaccccgtatccgtccagtgcta
gataatgtggcaacgatcagctatgagctatcagaggctgaatacgcagataatgaggtt
aacgacccatgggttcaaagacttcttcatgctgttgagacgaatgtagcatggctccag
ccgctaatgactgccaacaactacgactcatttgtgcattttgtcatcgagttcattgtg
aagaggcttgaagtgattatgatgcagaagagattcagccaacttggaggccttcagctc
gacagagatgccagggcattggtaagccacttctctggtatgactcaaaggaccgtcaga
gacaaatttgcgcgtctcacacaaatggcgacaatcctgaacttggaaaaggtctcggag
attcttgatttctggggcgagaactcgggacctatgacctggagactgaccccagccgag
gtcaggcgagtcctgggtctgagagttgattttaaaccagaagcaatttccgctcttaag
ttgtaa
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