Malus domestica (apple): 103410265
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Entry
103410265 CDS
T03194
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103410265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103410265
Spliceosome [BR:
mdm03041
]
Complex A
Other components
Complex A specific factors
103410265
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103410265
NCBI-ProteinID:
XP_028961908
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All DBs
Position
07:32302986..32305370
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AA seq
794 aa
AA seq
DB search
MEAALPSNPNPPPPIESLDPHPPPSETLPSYDFNPPPPAETLASDSNGPPQPPHTETLAS
DAQNPFPNPQIATENGTSTDACKKLAITKPLLSENGLTNTNSGNERDGSGGEEETTSRRR
RRSRWDPQPESESQSGGGETGSGTRKRKSRWADEEPKAIQLPDFMGGIEFDPEIQALNSR
LLEISRMLSSGLPLDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKERQEIIAQII
KRNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRG
KGSVKEGRSQQKRDLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVDEVLNEHKR
QQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPV
KGTTGKKMDDEYQNFLAELGGTVPESATKQTATLALGPGNSTSSNPPWANSTSSTSSASS
HPGLGSIGVKPVKDYDETNLYIGYLPPTLDDDGLIRLFSAFGDIVMAKVIRDRVTGASKG
YGFVKYGDVQMANNAIASMNGYRLEQRTIAVRVAGKPPQPAGPPASAMPTYPVPQPVASY
PSQQFTPSGPLGNAPPTSYAGAPVPWGPPVPPPYAPYAPPPPPPPGSTMYPPPMPGQHMS
PYGARYPPPPGAPPQPMTSNEAQQSYPPPGVQSEHNVSTQSLQTNLYGGSSAPMPPNGQH
TYPAASYGYSSYYNAVPPPPPPPGPVPGSTADQSQNIGNVPWATSAPVPPPASSAEKTTY
GADAEYEKFMAEMK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgctcttccatcaaaccctaaccctcctcctccaatcgaatccctagatcct
catccccctccttccgaaaccctaccctcctacgatttcaatccccctcctcctgcggaa
accctagcctctgattcgaatggcccgcctcaaccgccgcacactgaaaccctagcttcc
gatgctcaaaaccccttcccaaatccccagatcgctactgagaacggtacttcgaccgac
gcctgcaagaagcttgctattacgaagccgctgttgtcggaaaacggcttgaccaacacc
aatagcggcaacgaaagggatggctcgggcggggaggaggagacgaccagcaggcgccgc
cgccgcagccggtgggatcctcagcccgagtcggagagtcagagtggtggtggcgagacg
ggcagtgggacgaggaagaggaagtcgcggtgggcggatgaggagccgaaggcgattcag
ctgccggatttcatgggaggtattgagttcgatccagaaattcaagctttgaatagtagg
ttgcttgagattagtcgaatgctgtcttcgggtttgcccttagatgatcgtcccgaaggg
gctaggtctccttcgccggaacctatatatgataacatgggaattaggattaatacgaga
gagttccgtgcccgtgaaaggttgaacaaagagaggcaggaaattattgctcagattatt
aagaggaacccggcatttaagcccccggctgattacaggccacccaagcttcataagaag
ctttacataccgatgaaggaatatcccggatacaattttattggacttatcattgggccg
aggggtaatacgcagaagaggatggagaaagaaactggtgcaaaaattgtcattaggggt
aaaggttcggtgaaagagggcaggtcgcaacagaagagggatttgaaacccgacccttca
gagaacgaggacttgcatgttttggttgaggcagatacacaagacgctcttgatgctgcg
gctgggatggtggagaaactcttgcagcctgttgatgaggtgttgaatgagcataagagg
cagcaacttagggaacttgcggctttgaatgggacaataagggatgaggagtattgtagg
ttgtgtggtgagccggggcaccgtcagtatgcttgtccatcacgtacttcgaccttcaag
agcgatgttctttgtaagatatgtggtgatggtgggcatccaaccattgattgcccagtg
aagggtacaactgggaagaaaatggatgatgagtatcagaacttcttggctgagttgggg
gggacagttcctgaatccgcaactaagcagaccgctacattggcacttggcccaggcaac
agtacatcaagcaatcctccttgggctaacagtactagcagcactagcagtgcatcatca
catccaggcttgggatcaattggagtcaaaccggtcaaggactatgatgagacaaacttg
tacattggatacttgccgcctacccttgatgacgatggtttaatccgattgttttcagcg
tttggtgatattgtgatggccaaagttatcagggaccgggttaccggagcgagtaagggt
tatggttttgtgaagtatggagatgttcagatggctaataatgcaattgcaagcatgaat
ggttatcgcctagagcagcgaaccattgctgtcagagttgctggcaagcctccgcagccg
gctggacccccagcatcggcaatgcccacataccccgttccccagcctgttgcttcctat
ccatcccagcagtttacccccagtggtcctcttgggaatgcaccacctactagctatgcg
ggtgctcctgttccttggggaccccctgttcctcctccttatgctccttatgctccgccg
cctccacctcccccgggttcaaccatgtatcctcctcccatgccgggtcaacatatgtct
ccttatggtgcacgataccctcctccccctggtgcaccacctcaaccgatgacttcaaat
gaagcacaacagagttatccccctccaggagttcaatctgaacacaatgtctctacccaa
tctctacaaactaatttgtatggtggctcctcagcaccaatgccaccaaacggccaacac
acttatcctgctgcttcatatggttactcatcttactacaatgcagttccaccgcctcca
cctccccccggccctgtacctggatcaactgcagatcaatctcagaacattggtaacgtt
ccatgggccacgagtgctccggttccccctcctgcttcttctgcggaaaagacaacttat
ggtgcagatgcagagtatgagaagttcatggcagaaatgaaatga
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