Malus domestica (apple): 103410390
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Entry
103410390 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103410390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103410390
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103410390
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Motif
Pfam:
Ion_trans
cNMP_binding
NitrOD2
SpoIIM
Motif
Other DBs
NCBI-GeneID:
103410390
NCBI-ProteinID:
XP_028962054
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All DBs
Position
07:join(35652266..35652271,35654513..35654911,35655021..35655215,35658491..35658807,35658906..35659017,35659132..35659257,35659531..35660034)
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AA seq
552 aa
AA seq
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MRGVIFDVHQGPYLQMWNSIFVISCVFAVSLDPLFFYVVNVNQDEKCLHTDKKLEIVALV
MRSLTDVIFVVHLICEISYSVQKTMEKNEEVKQTWGNSSKKWEARELIQYARKIAQNMSW
LSVIIDVLALVPLPQLIILMFYPKEGSGFVENTMFVNVFLLGQYVPRIFRIHLSAKAFKM
MNGIWPKGLFNLFLYILAGHVLGAFWYFFSIQREASCWHDACVKLSYELCNGTFCVGCKD
TLYCDSGHSTRNIRYLNKSCPLDTPDDALSPFDFGIFLDSLKNENPDQKFGNKFLYSFWW
GLRNLSNFGTNLETSTYSWENLFAIFISVTGLLLFLYLIGNVQAFMQMEATKKEEMRRQG
IKTTKTEEMRRQGIKTEEAIKTLKEIPMLKDMDEKVLKMMCDYLKPATYSENSFIFRTGD
PLDCMLLIIEGTMWTYASSDSHAGQGISSMGIKPLRKGDFYGEELLDWASDFTKVPVSSK
HVKCHTKVKAFVLMAEDLGTVVSPRPHGDLLNRNNAEEVKATLSAALRSHTKAAQRLPPP
SLAEIGDDNSEN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggtgatttttgatgtgcatcaggggccttaccttcaaatgtggaacagtata
tttgtgatctcatgtgtatttgctgtctctctggatcctttgttcttttatgttgtgaat
gtcaatcaggatgaaaagtgccttcacacggacaaaaagttggaaattgttgctcttgtt
atgcgatcactcacggatgtcattttcgtcgtgcatttgatatgtgaaatttcatactct
gttcaaaagacaatggagaaaaatgaggaggtgaaacaaacttggggaaattccagtaaa
aaatgggaagccagagagttgattcaatatgccaggaaaatagctcagaatatgtcgtgg
ttatccgtcataattgacgttttagctcttgttcccctcccacaactgataatactaatg
ttttacccaaaggaaggctcaggatttgtggaaaacacaatgtttgtgaatgtgtttctt
ctcggtcaatatgttccgaggatttttcgaattcacctgtcggccaaggcattcaaaatg
atgaatgggatatggcctaagggtctattcaacttgtttctctacattcttgctggtcat
gtactcggagctttttggtattttttttctattcaacgagaggcatcatgttggcacgat
gcttgtgtaaaacttagttatgaattatgtaatggcactttttgtgttggatgtaaggac
acattgtactgcgatagtgggcattctacaagaaatatcagatatctaaacaaaagttgc
ccgttggatactccagatgatgctttatctccatttgactttggaatatttctcgattcc
cttaaaaatgaaaacccggatcaaaagttcggcaataagtttttatactctttctggtgg
ggcttgcgaaatctaagtaattttgggacaaatctggaaacaagtacgtattcatgggaa
aacttgtttgcgattttcatttcagtgactggcttgctactgtttttatatcttattgga
aacgtgcaggcttttatgcagatggaagctacaaaaaaagaggaaatgagacgacaaggt
ataaaaacaacaaaaacagaggaaatgagacgacaaggtataaaaacagaggaagctata
aaaacacttaaggaaataccaatgcttaaagacatggatgaaaaagtgttgaagatgatg
tgcgactatctaaagccagcgacgtacagtgagaacagcttcatttttcgaacgggagat
ccactcgattgcatgctgttgattatcgaagggacaatgtggacctacgcgtcgagtgat
agtcatgctgggcaaggaatctcatcaatgggcatcaagcccctcaggaaaggtgacttt
tacggggaagagcttctcgattgggcatcagacttcaccaaagttccagtctccagcaaa
catgtcaaatgtcatacaaaagtaaaagcatttgtgctcatggccgaggacttgggaact
gtagtctccccaagaccacatggggacttgctcaatcgtaacaatgctgaagaggtgaag
gcgacgctgtctgctgctcttcgttcccataccaaggcggcgcaacgacttccgcctccg
tccctggctgaaataggggatgacaatagtgagaactag
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