Malus domestica (apple): 103410580
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Entry
103410580 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103410580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103410580
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103410580
03036 Chromosome and associated proteins [BR:
mdm03036
]
103410580
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103410580
Peptidases and inhibitors [BR:
mdm01002
]
Metallo peptidases
Family M67
103410580
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103410580
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
103410580
BRISC complex
103410580
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
103410580
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
103410580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
103410580
NCBI-ProteinID:
XP_008347485
LinkDB
All DBs
Position
17:join(25054702..25054812,25057134..25057259,25057992..25058079,25058997..25059082,25059154..25059369,25060041..25060219,25061330..25061488,25061563..25061643,25061735..25061789,25062141..25062347)
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AA seq
435 aa
AA seq
DB search
MSLASVKMSEDVWLTCLTHALSTETEEIMGLLLGDIENSVNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTLSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQHHMSRPISLSPIHKSPVIEVESSLSTS
ENVPARSTLTRAGSPEQDTADSRTSGTIKGGGRSSDLGLLFANADASHLGRVGGNYQTDT
SSNIIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLHVLPTSSLVKLDSPLMSFTE
LQRVLYEEEQAAYNQAILQNMRDGKVHPLTFIHHTSMYQSSMCKLIEYCLSPAISALQCR
LRENETRLAVLTDEVKNLETEMHRTSESNSGSPRPVSSPVLRGSAPLGHRDLFHPTESVS
ARSLAGSGSRSRKGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcgtctgtgaaaatgtcggaggacgtgtggctgacgtgcctcactcacgca
ttgtccaccgagacggaggagatcatgggcctcctgcttggtgacattgagaactccgta
aatggcagtgtgacagcactaatttggggagcatcacctcagacacgatctgatcggagg
aaggatcgtgtggagactaatcctgagcagttggctgctgcatcagcccaggccgagaga
atgacactgtcaactggaagaacaactagagtgattgggtggtaccattcacatcctcat
attacagttctcccatctcatgttgacgtgcggacgcaggcaatgtatcaacttctagat
tctgggtttattgggctcatattttcctgttttagtgaagatataaacaaggttgggcga
atccaagtcattgcatttcagtcctcagatgggaagcagcatcacatgtcaagacccata
tctttatctcctatacataaaagtccggttatagaagttgaatcgtctttaagtacctca
gaaaatgtaccagcgagatccaccttaactagagcagggagtcctgaacaagacacagct
gattcaagaacttctggaactataaagggtgggggaaggtcctcagacctagggcttctc
tttgctaatgcagatgcaagtcatctaggaagagttggaggaaactaccagactgacaca
tcaagcaacatcattggcgatatagatcccatggatatgtcagagagtatgcaagaagca
atgcaccgttctaacttggatatgagtggtgccgagtatgtcaggaaagaagttcctctt
catgttttaccgacctcatctcttgttaagctcgattcacctttaatgtcattcacagaa
ttgcaacgagtactgtatgaagaggagcaagcggcttataaccaagcaatcttgcaaaat
atgagggatgggaaagtgcatccacttactttcatacaccatacatcaatgtaccagtct
tccatgtgcaaattaatcgaatattgtttgagtcctgccataagtgcactgcaatgtcgg
ttaagagagaatgaaactcggttagcagtgctcaccgatgaagtgaagaatttggaaacc
gagatgcatagaacaagcgagtcaaactcaggatctcctcgtccagtttcatcgcctgta
ctccgtggaagtgctccgttggggcacagggacttgtttcatccaactgaatctgtcagt
gcaaggagtctggctggttctggcagtcggagccgaaaaggttcataa
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