KEGG   Malus domestica (apple): 103411048
Entry
103411048         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103411048
Enzymes [BR:mdm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     103411048
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103411048
 Prokaryotic type
    103411048
SSDB
Motif
Pfam: PseudoU_synth_1 DUF835
Other DBs
NCBI-GeneID: 103411048
NCBI-ProteinID: XP_008347917
LinkDB
Position
08:complement(join(30325180..30325277,30325381..30325441,30326096..30326338,30326798..30326860,30326957..30327056,30327666..30327748,30327905..30327958,30328336..30328413,30328599..30328655,30328858..30329106))
AA seq 361 aa
MSENLKHPLELDSISSSQSPQRPPKVSKTADDLSDGDQESQQPQRMSQQARIQRYLLAIE
YIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDVNRI
SKRKPAEVLEPHEPSVVKRAVNHFLQKNEGDVMVIDVQSVPADFHARYKAQERTYFYRLL
FGPEPLPTFEKDRAWHVPNELDLCAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELN
VSEVVSSPYFPSIMERKQNNLVEEDPHAHANKSETDTSSSFNGGLGFGVRKKHRCFVVTA
RARSFLYHQVRLLVGVLKCVGTGDLRIPDVERILNAKTVTAASPMAPACGLYLGQVKYDL
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcagaaaatcttaagcacccactcgaactagatagcatcagtagctcccaatctccc
caaaggcctccaaaggtctccaaaaccgccgacgatctcagcgacggggatcaggaatca
cagcaacctcaacggatgagccaacaggctcgaatccagcggtatctactggcaatcgag
tacattggtactcgcttttcgggctcgcagcagcagtccaattgccgcacagttgttgga
gtccttgaggaggcatttcgtaaatttattggccagccggtttcaattttctgttccagt
cgaactgatgcaggagttcatgccttgtcgaatgtttgtcatgtagatgtcaatcgcata
agcaaaaggaagcctgctgaagtgttagaaccccatgaaccttcagttgtcaaaagagct
gtgaatcatttcttacagaagaatgaaggtgatgtaatggtgatagatgttcaaagtgtt
ccagctgattttcatgctcgatataaagcccaagagcgcacgtatttctaccgtcttctg
tttggaccagagcctttgccaacctttgaaaaagaccgcgcatggcatgtacccaacgag
ctggatctttgtgctatgcaggaagcatgcaaagttttggttggacatcatgattttagt
tcctttagggcagcgggttgtcaggcaaaatcgccgatcagaacgttggatgaacttaat
gtttctgaggtagtgtcaagtccttattttccatcaataatggagaggaaacaaaacaat
ttagtggaggaagatcctcatgcccacgctaacaaatctgagaccgatacatcctctagt
ttcaatggaggactaggatttggcgtgagaaaaaagcaccgttgctttgtggtaactgca
cgagcacgttcttttctgtaccaccaggttagactgcttgttggtgtactcaaatgcgtt
ggcaccggagatttaagaatacctgatgttgagaggatcttgaatgcaaagacggtgact
gctgctagtcccatggcgcctgcttgtggtctgtaccttggacaagtgaagtacgatttg
ccatga

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