Malus domestica (apple): 103411264
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Entry
103411264 CDS
T03194
Name
(RefSeq) homeobox-leucine zipper protein HDG2-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103411264
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103411264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DciA_cyano_C
TUSC1
MRP-L20
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
103411264
NCBI-ProteinID:
XP_008348131
LinkDB
All DBs
Position
09:join(7443055..7443144,7443877..7444094,7444203..7444320,7444452..7444640,7444804..7445247,7445402..7445503,7445617..7445820,7445977..7446151,7446413..7446684,7447088..7447183,7447315..7447656)
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AA seq
749 aa
AA seq
DB search
MIPARNMPSMIGSNGNINGFASSSGLTLGQPNMMEAGHLHPLDMATNTSESDIARFRDDD
FDSATKSGSDNPEGGSGDDQENRRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELS
RELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRADNMRYREALGNASCPNCG
GPTALGEMSFDEHHLRLDNARLREEIDRISAIAAKYVGKPLGNYPLMSSPVPSRGPLDLG
VGSFGGQPGMGGEMYGAGDLLRSISAPSEADKPMIIELAVAAMEELVRMAQMGEPLWMTS
LDGSMTVLNEDEYIRTFPRGVGPKQNGFKTEASRESAVVIMNHINLVEILMDVNQWSTVF
SGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYYVRYCKQHADGTWAV
VDVSLDNLRPNPAPRSCQRRPSGCLIQEMPNGYSKVTWVEHAEVDERGVHNLYKQLVSSG
HAFGAKRWVATLDRQCERLASAMASNIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVS
ASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDEN
SRSEWDILSNGGIVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCSDPTASFV
IYAPVDIVSMNVVLNGSDPDYVALLPSGFAILPDGAGIGDSGSGGGSLLTVAFQILVDSV
PTAKLSLGSVATVNNLIACTVERIKAALS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattccggctagaaacatgccttcgatgattggaagcaatgggaacattaacgggttt
gcatcatcttcaggactcacacttggtcagccaaacatgatggaagccggtcatctgcac
ccgttagacatggctacaaacacctctgaaagcgacattgctcggttccgagatgatgac
ttcgacagtgctaccaaatccggcagcgacaaccctgaaggcggttccggtgacgaccaa
gaaaaccgtcgacccaaaaagaagcgttatcaccgccacacacagcatcagatccaagaa
atggaagcttttttcaaggaatgtccccacccagatgacaagcagaggaaggaactgagc
agagaattaggtttggaaccattacaagtcaaattttggtttcaaaacaagcgcacccaa
atgaagactcagcatgagcggcatgagaacacacaacttcggaacgaaaacgaaaagctc
cgtgctgataacatgaggtacagagaagcgctaggtaatgcctcatgccctaattgtggc
ggcccaacagctctaggagagatgtcattcgacgaacaccatctgagactcgataatgct
cgattacgagaagagatcgatcgtatatctgcgatagctgcgaagtacgttggcaaaccg
ttgggaaactaccctctcatgtcttctcctgttccttcccgtggtccacttgatcttggg
gttgggagctttggtggtcagccaggcatgggcggtgagatgtatggtgctggagacctt
ctcaggtcaatcagtgcaccaagtgaggcagacaagccaatgataattgagcttgctgtt
gcagctatggaggaactcgtcagaatggcccaaatgggtgaacccttgtggatgaccagc
cttgatggcagcatgaccgtacttaatgaagatgagtacatcagaacattccctcgtgga
gtcgggccaaaacaaaatggcttcaaaactgaagcttcgcgtgagagtgcagttgttatc
atgaaccacattaaccttgttgagattctcatggatgtgaatcagtggtcgactgtattt
tctgggattgtgtcaagagctttgacccttgaagtcttatcaactggcgtggctggaaat
tacaatggagccttgcaagtgatgacggcagaattccaggttccttcaccacttgttcca
actcgtgagagttattatgtgaggtactgcaaacagcatgctgatggcacctgggctgtg
gttgatgtttccttggacaacttgcgccctaatcctgcacccagatcttgtcaaagaagg
ccctcaggatgcctaattcaagaaatgccaaacgggtattcaaaggttacatgggttgag
catgctgaagtggatgaaagaggtgttcacaacctctacaagcagctggttagctccggc
cacgcatttggcgctaaacgatgggttgccaccttggacaggcaatgcgaacgtctggct
agtgcgatggcatcaaacatccctaccggtgatgttggagtgattacaaatcaagaaggg
agaaaaagcatgctaaaattggctgaaagaatggtgattagcttctgtgctggagtgagt
gcatcaaccactcacacatggaccacactgtctggaaccggggctgatgatgtccgggtg
atgacccgaaagagtgtggatgatcccggaaggcctccaggtattgtgctcagtgccgcc
acatctttctggctgccagttcctcccaaaagagtctttgagtttctccgcgatgagaac
tctcgcagcgagtgggatattctttccaatgggggaattgttcaagagatggcacacatt
gctaatggtcgtgacactggaaattgcgtgtctctactacgagtaaatagtgctaattca
agccagagcaacatgctgatactgcaagaaagctgctctgacccaacagcttcctttgtg
atttatgcaccagttgacattgtttccatgaatgtggtgctgaatgggagtgaccctgac
tatgttgcccttcttccttctgggtttgctatactcccggacggagccggcattggagac
tctggctctggtggtggttcccttctcactgttgcttttcagatcttggttgattcagtc
cccactgctaagctgtctctcggatcagttgcaacagttaacaatcttatcgcttgcact
gttgagaggatcaaagctgcattgtcatga
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