Malus domestica (apple): 103411308
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Entry
103411308 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K03504
DNA polymerase delta subunit 3
Organism
mdm
Malus domestica (apple)
Pathway
mdm03030
DNA replication
mdm03410
Base excision repair
mdm03420
Nucleotide excision repair
mdm03430
Mismatch repair
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103411308
03410 Base excision repair
103411308
03420 Nucleotide excision repair
103411308
03430 Mismatch repair
103411308
03440 Homologous recombination
103411308
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103411308
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdm03032
]
103411308
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103411308
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103411308
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103411308
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103411308
MMR (mismatch excision repair)
DNA polymerase delta complex
103411308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
103411308
NCBI-ProteinID:
XP_070675423
LinkDB
All DBs
Position
03:complement(join(32757055..32757184,32757794..32757917,32758144..32758644,32758824..32758977,32763907..32764208,32764622..32764728,32765456..32765615,32766168..32766292,32766367..32766422,32766974..32767033))
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AA seq
572 aa
AA seq
DB search
METLGIIQDIETLVSDQLQVVSYKWLSRNYFVSSNAAKRLLQEFVEKHGNGFEVVHVLAG
WLKSDPSSYHIRLVSGPKLAEAKEEFDGNCSVGVYSVQACIPKDPAALWNAEFVQAEKLF
KQAPMVENCLRDNRFCGISNSFVKRNVDGAPLSTESPQLNSEAVIGQPENSNWGSSSNSK
REAKWAQMRREDEESDEEVQVRRNKQNRAAAMAAAMVCQPTEEQPQWGGFIAGRSYKPRN
GAMTHVNLMNNYFDLNSVYTEEDFRRDVQQANKRPADKEKVQNENSSSASGGSLANFWGQ
ASVKSKSDAPEKYNNSIPDHTGASAEPQTCAREAVAGSSDDDGQQVNLKRSSNSGGTRKR
RVVFDFSDDDEDAVNLASREIPKGQSCLYLKESNKVMVPERPNLNFDKQVEDNPKVKEEI
SVDGESNQPFREDPSVVKKVINAGIILKEKKRIPEKDVNKVDKPTNAASSSPKRRKVVKT
VIDDRGREVTEVIWEGEETEAKKADSDIIKTADSDILKKSDNKAASAVNRPPAVKKSVGN
TAPTNATGKAGNKKGVNKDPKQGNILSFFKKV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctgggaatcatccaagacatcgaaaccctcgtgtccgatcaacttcaagtg
gtttcctacaagtggctgagtcgaaattactttgtgtcttccaatgctgcaaagaggtta
ctccaggagtttgttgaaaaacatggaaatgggtttgaagtggtgcatgttttggctggc
tggttgaagagtgatccttcgagctaccatataaggcttgtttctgggcctaaacttgca
gaagcaaaagaagaatttgatggcaactgctcggtcggggtttatagtgtgcaagcttgc
atcccaaaggatccagctgcactgtggaatgctgaatttgtgcaagcggaaaagctcttt
aagcaggctcctatggttgagaattgcttgagagataacaggttttgtgggatttccaat
tcctttgttaagcgtaatgtggacggagcaccattgagcactgaatctccgcaacttaac
tctgaggcagtaatagggcaaccagaaaattccaactgggggtcctcttccaattccaaa
agagaagcgaaatgggcgcaaatgagacgagaagatgaggagtctgatgaagaagttcaa
gtaaggcgtaacaaacaaaacagagcagcagccatggctgcggccatggtgtgtcagcca
actgaggaacaacctcaatggggtggctttattgctggtcgctcttacaaaccacgaaac
ggagcgatgacgcatgtcaatctgatgaacaactacttcgacctcaactcggtgtacacg
gaagaggatttcagacgtgatgtccaacaggctaacaaacgtcctgcagacaaagaaaaa
gtccagaatgagaatagctcctctgcttctggaggttcattggcgaatttctggggccag
gcatctgtgaagtcaaagtcagatgctccagagaaatataataattccattcctgatcat
actggagctagtgcagagcctcaaacttgtgctcgagaagcagtagcgggtagcagtgac
gatgatggtcaacaagttaatcttaagagatcttccaacagtgggggcactcggaaaagg
agggttgtctttgatttctcagatgacgatgaagatgcagttaatttagcatcacgggag
attccaaaagggcaatcatgcctatatctgaaagaaagcaataaagttatggttccagag
agaccgaatttgaattttgacaagcaggtagaagataaccccaaggttaaggaagaaata
tctgttgatggggaatccaaccaacctttcagagaagatccttcagttgtcaaaaaagtg
ataaatgctgggattatccttaaagagaagaaacgtattcctgaaaaggatgtgaacaaa
gtggataaacccaccaacgctgcttcaagttcaccgaaaagaagaaaagttgtgaagaca
gtgattgatgatagaggaagagaagtgactgaagtaatctgggagggtgaggaaacagaa
gcaaagaaagccgacagtgatataatcaagacagccgacagtgatatactcaagaaatct
gataataaagctgccagtgctgttaacaggcctcctgcagttaagaagtcagtgggaaac
acggctccaacaaatgcaacagggaaagcgggaaacaagaaaggagtaaacaaggatcct
aagcaaggaaatattctttcattcttcaagaaggtctaa
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