KEGG   Malus domestica (apple): 103411332
Entry
103411332         CDS       T03194                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdm03036]
    103411332
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103411332
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    103411332
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH Helicase_C ResIII HHH_5 Cdd1 DNA_pol_lambd_f AAA_22 IMS_HHH_1 HHH Abhydrolase_9
Other DBs
NCBI-GeneID: 103411332
NCBI-ProteinID: XP_028963556
LinkDB
Position
09:join(1700179..1700246,1700458..1700641,1701079..1701240,1701590..1701827,1701970..1702006,1702102..1702148,1702410..1702447,1702597..1702618,1702748..1702960,1703057..1703213,1703303..1703354,1703467..1703538,1703696..1703745,1703856..1703973,1704062..1704125,1704238..1704321,1704415..1704540,1704630..1704826,1704936..1705124,1705216..1705467,1705546..1705595,1705753..1705770,1705930..1706012,1706133..1706319,1706436..1706473,1706570..1706920,1707026..1707528)
AA seq 1199 aa
MDSYTLKSMSDLPAPFRSSFNFRYFNSLQSECFPVCFHSDTNMVVSAPTGSGKTVIFELC
ILRLLSRFLSEDGRLGRTNGTLKTIYIAPSKALVQEKVRDWNQKFGSWGITCLELTGDNE
SYNIRNIQEADIILTTPEKFDAVTRYRAKDGGMSFFSDIALLLIDEVHLLNDPRGAVLEA
IVSRIKMLAQNPELKSSSLAHVRFLAVSATIPNIEDLAEWLKVPVQGIKRFGEEMRPVKL
TTKVFGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLTQTVMA
FGHSNPFIKSREQQERLREASFSCGDKQMQSYIPYGVGYHNGGLSMKDRNLIESLFLKGD
IQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTG
MVVIMTRKDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSNIPRAIEWMKCSFL
YVRMKKNPVHYSVRKVISKDRIEKHMQEVCLQKVNELSQHQMIWTDKDGFLLKPLEPGRL
MTKYYLKFDTMKHIMQTPVNCSLEDALHVICRAEEISWIQLRRSEKKLLNDINADKDGRL
RFHALGDKGRRQKRIQTREEKTFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMK
EFFIYQKNYKGALNSMLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFDTLA
EADPRRIEIVTGRKYPFGNHLKESLHSLPPKVEMKFEENECQRQGKLKLVVTLTRLSPTL
QPTKRHYADMIIGSEEDNLIVFHEKIRVEEFSSPYSATILLSNPQQGKLTVKADLVFEEY
IGIDLSQKLVLMKEGNNKRGKKPPSCPPPKEVCVIEDDAETIRQAPTKEHPKSTKSKRVD
GSMPSFNLLDDEFEEDEVAAKDEEEDCKIITHQTVFDHIREKAKNFPVLVASNGAHSAST
EPLVLTRKRAREKQIEPHREFEVLEELEWNKIPRRTAVNPSSKPKEAEQNQHNTNNLPTP
RSSATLNPMDDREAGLPLEPEDGTFKTARDETIFEHIRTKAKNFPVINKPKVVDSGYPTM
KEHPSKSRLEFSIDTTGTLKGTAKSNKVPRDTAFDSDSGTRKASNVSPRGLGDGAAKMLS
FDISMLKNTKKSPEPGSAGKRKHELSPLVPQRQWCSLTSAGKTREADTFLGFESIFSFL
NT seq 3600 nt   +upstreamnt  +downstreamnt
atggattcgtatacactgaagtccatgtcagatttgcctgctccctttcgatcatcgttt
aattttaggtacttcaattctctgcagagcgaatgttttcctgtttgtttccactcagat
acaaacatggttgtgtcagcaccaactggaagcggtaaaacagtcatcttcgagctttgc
attctgaggctcctttcacgatttctctctgaggatgggaggcttggtcgtacaaatgga
actctcaaaacaatctatatagccccatcaaaggctttagtccaggagaaggttcgtgac
tggaaccagaagttcgggtcttgggggataacttgcttggagcttactggagataatgaa
tcttacaacatcaggaatatacaggaagcagacattatattaaccactcctgagaaattt
gatgcagtaaccaggtatcgtgcaaaggatggtggaatgagctttttcagtgatatagca
cttctacttattgatgaagttcatctgttgaatgatcctcgtggagcggttttggaggca
atagttagtagaataaaaatgcttgctcagaaccctgaattaaaatcaagctctctggct
cacgtacgttttctggctgtgtctgccaccattccaaatattgaggaccttgcggaatgg
ctcaaggttcctgtccagggaattaaaaggtttggagaagaaatgaggcctgtaaagttg
acaacaaaagtttttggttacacccccgcaaaaaatgattttctatttgaaaagcgcctt
caaaactacattttcgatatcctcatgcaatattcaagagggaaatccgctttggttttc
tgttcaactagaaaaggtgcacaagaagcagcacagaggctcacgcagacagtcatggcc
tttggccactcaaatccattcattaaaagcagagaacagcaagagaggctaagggaagct
tcattttcatgtggtgacaaacaaatgcaatcttatattccttacggtgttggttatcac
aacggtggcctttccatgaaggatcgtaacctcattgaaagtctttttcttaagggtgat
attcaagttttgtgcacaacaaatacccttgctcatggaatcaacctaccagcacataca
gtagttataaaatcaacacagcacttcaacaaagaaaaaggtctctacatggaatatgac
cggtctacaatactacagatgtgtgggagggctggccgaccaccatttgatgatacagga
atggttgtaatcatgacaagaaaagacacggttcacttgtacgaaaatctattgaatgga
tgcgagatggtggaatcacaattgctttcatgtttgacggagcatttaaccgctgagata
gttcaattgactgtctctaatattccaagggcaattgaatggatgaagtgctctttcttg
tacgtgagaatgaagaagaaccctgtgcactattcagttagaaaagtgatttctaaagac
cgtatagaaaagcatatgcaagaggtctgtctgcagaaagttaatgagttgtcacagcat
cagatgatatggacggataaggatggttttcttttgaaaccactagaacctgggaggctg
atgacaaaatactacttgaaatttgacacaatgaaacacattatgcagacacctgtaaac
tgcagtttggaagatgctcttcatgttatatgtcgagctgaggaaatttcatggatacaa
ctcagacgcagtgagaagaagcttttaaatgacataaatgctgataaagatggccgactt
cgctttcatgcccttggtgacaaagggaggcgacaaaagcgtattcagaccagagaagaa
aaaacatttgttctggctaatgactgcttgaccggtgatccttcggttcatgatctatcc
cttactcaggatatgaactctatatgctcaaatggctgtagaattgcaaggtgtatgaaa
gaattttttatttaccaaaagaactataagggagccttgaactcgatgcttctggcaaag
tcgttatatcaaaaactctgggatgacagcccatacctgctgaaacaattacccgggatt
ggaatggtgactgcaaaggcactacattcaatgggagtcagatcgttcgacacactggct
gaggctgatcctaggagaatagagatagtcactggtcgaaaatacccatttggaaaccat
ttaaaagagtctctacattcactacctccaaaagttgagatgaagttcgaagaaaatgag
tgtcagaggcaagggaaactgaagctcgtggtaacattgactaggctatcaccgacactc
caaccaaccaaacgacattatgctgatatgattattggttcagaagaggataacctgatt
gtctttcatgagaagataagagtggaggaattctccagcccctatagcgcaacaattctt
ctgtcgaatccccaacaaggaaagctcactgtaaaggctgatcttgtttttgaagaatac
atcggcattgatctctcccagaaacttgtattaatgaaggaaggcaataacaagcgggga
aaaaagccgccttcttgtcctccacctaaggaagtatgtgtcatagaggatgatgctgaa
actatacgtcaggctccaacgaaagagcatcccaaatcgaccaaatccaaaagggtagat
ggttccatgccgagtttcaacctcctggatgatgagttcgaagaagacgaggttgctgcc
aaagatgaagaggaggattgcaaaatcatcacacaccaaacggtatttgatcacatacgt
gaaaaggcaaagaacttccccgtcttggtggcatcaaatggtgcgcattctgcatccaca
gagcccttggttttgacaagaaagcgtgctcgtgagaagcagattgaaccccatagagaa
ttcgaggttctggaagagttagaatggaataaaattccaaggcggactgcggtgaatcca
tcttcaaaacccaaagaggcagaacaaaatcaacataacacgaacaatctccctactccc
agaagctcggctaccttgaacccgatggatgacagagaagctggtcttcctcttgaaccc
gaagatggaactttcaaaactgcaagagatgaaacaatatttgagcacattcgaacaaaa
gctaagaattttccggtgatcaataaaccgaaagtggtggattctggttatccaaccatg
aaagaacatccttccaagagtcgccttgaatttagtatcgatacgactggcacgctgaaa
ggaacagcaaagtcaaacaaagttccgagagacactgcattcgactcagattcgggaacc
agaaaagcatcaaatgtgtctcctagaggtttaggcgacggtgctgcaaaaatgctgtct
tttgatatctccatgttgaagaatacgaagaaatcaccggaaccaggcagtgctggcaag
aggaaacatgagctttctccgcttgtaccacaaaggcagtggtgctcgttgacatctgct
ggcaaaaccagggaagcagacacatttcttggatttgagagtatcttttcgttcctctga

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