Malus domestica (apple): 103411384
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Entry
103411384 CDS
T03194
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103411384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103411384
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103411384
Prokaryotic type
Archaeal type
TFB
103411384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
103411384
NCBI-ProteinID:
XP_008348242
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All DBs
Position
09:complement(join(4328783..4328919,4329322..4330141))
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AA seq
318 aa
AA seq
DB search
MEAKEFCRDCKQETDVVSDHRSGDTICTVCGLILEARYIDETAEWRNFADQNPEEDRTRV
GKASDPLLDNGVLSTCIFKEKKKNNKKGTDADGNFPPNKWTNRAVNPSNSLLKPFKYLEE
MADRLDIHEGVPNCILDHAKGLYKKADDKNFCKGRNSNPIMAACLLLAFEESQNTRTLKE
ITMVANGPSKKEISKMKEELKRRLGIASKIKSAMDLWPRHCSNLGISSKDKKAVEEALKN
LANFDIRRNPNSVVAAVMYMVVQLSNGNNCSVQEVSKAADGVAVGTTKKTYKDIYPYASQ
IIPTWFCGLEGFKKLITP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaagagttctgtagggactgcaagcaagagacagacgtcgtgtccgaccac
aggtcgggtgacacaatctgcaccgtctgtggtttgatcctcgaagcccgctacatcgat
gaaaccgccgagtggcgaaattttgccgatcagaaccctgaagaagaccggactcgcgtc
ggaaaagcctccgatccgttgctggataatggtgttctttccacttgtatattcaaagaa
aagaagaaaaacaacaagaagggtactgatgccgatggtaattttcctcctaataaatgg
accaatagggctgtaaaccctagcaattctctcctaaaacctttcaagtacctcgaagag
atggccgaccggctagacatacacgaaggcgttccgaattgcatactggatcatgccaaa
ggtttatacaagaaggccgatgataagaacttctgtaaggggagaaattctaaccccata
atggctgcttgcctcttgcttgcgtttgaagaaagccaaaatacgcgaacactaaaggaa
atcaccatggttgccaatgggccatctaaaaaagaaattagcaagatgaaagaagagttg
aagagaagattagggattgcttccaagatcaaaagcgccatggacctttggccgcgacat
tgttcgaatcttggtattagtagtaaagataagaaggctgtggaagaagccctgaagaat
ttggcaaattttgatattaggagaaaccctaattctgttgtggcagcggttatgtacatg
gtagttcagctttctaatgggaataactgttctgttcaagaagtctcaaaagcagctgat
ggtgttgctgtagggacaactaaaaagacatacaaggatatttatccctatgcttcacag
ataataccaacctggttttgcgggttggagggcttcaagaaacttatcactccttga
DBGET
integrated database retrieval system
