Malus domestica (apple): 103411591
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Entry
103411591 CDS
T03194
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mdm
Malus domestica (apple)
Pathway
mdm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103411591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103411591
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103411591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
103411591
NCBI-ProteinID:
XP_028961478
LinkDB
All DBs
Position
07:join(14747118..14747132,14747441..14747533,14748049..14748100,14748254..14748385,14748854..14749257,14749894..14750180,14750295..14750490,14750594..14750800,14751117..14751284,14751373..14751669,14752136..14752266,14752398..14752470)
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AA seq
684 aa
AA seq
DB search
MARNKDGMVLLIDVSPSMHKALPEIEKVCSMLVEKKLIYNKYDEVGVVLFGTEDTENELT
TEVGGYKHVVVLQNIKVVDGHLVETLQQLPRGTHEGDFLDAIIVGLDMLIKKYGETYKGK
KRLCLITNAQFPTKFPQEGTKEEQVTTIAGHMNKHGMRMESIVVRGKLTGEADKNIMDEN
DHLLGIFSRKTCAKLVHVESPTSLLGALRTRKISPVTIFRGDLELSPKMKIKVWVYKKTS
EEKFPTLKKYSEKAPPTDRFATHEVKVDFEYKSVEDPSKVVPPDQRIKGYRYGPQVIPIS
SAEWDAVKFKPEKSVKLLGFSDAKNIMRHYYMKDVNIFIPEPGNTRAILAVSALARAMKD
MNKVAIMRCVWRQGQGNVVVGVLTPNVSDNDNIPDSFYFNVLPFAEDVREFQFPSFSNFP
ESWQPSEQQQEAADGLVKMLDLAPPGKEEALLPSLTPNPVLERFYRHLELKSRQPDAVVP
PLDETLRTITEPDKELISQNKSIIDVFHSRFELKENPKLKKSSRRFLRDKPSGSKEGEDH
LSITDGPNKVEKIGDTTPVQDFEAMISRRDSPKWVGKAIKDMKNKIHDLVEDSYEGDNYS
KALECLIALRKGCILEQEPKEFNDFLCNLCKFCEEKALGSFCGFLASKELTLIPKREAID
SEVTDDEAKSFLVKSEPKLEAMIE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggatggtatggttttgttgattgatgttagcccgtcgatgcacaaa
gctcttccagagatcgaaaaagtttgctctatgctagtagagaagaagttgatttacaat
aaatatgatgaagtaggagttgtattgttcggaaccgaagacactgaaaacgaactgaca
acggaagtgggtggatacaagcatgtagtggttttacaaaatatcaaagttgttgatggg
catcttgttgaaactctacaacaactcccacgaggaactcatgagggtgattttcttgat
gccataattgttgggttggatatgctgatcaagaaatatggagaaacatacaaaggaaag
aaacgcctttgtctgattacaaatgcacaatttcctactaaatttccgcaagagggtact
aaagaagaacaagtcaccaccattgccggtcacatgaataaacatggtatgcgaatggaa
agtattgttgtgagaggaaaacttactggggaagctgataaaaacataatggatgagaat
gatcatctattgggtatattttcaaggaaaacgtgtgcaaagttggtacatgttgagagt
ccaacttcattgctaggtgctcttagaactcgaaaaatatctccagttacaatattcagg
ggtgatcttgagcttagccccaaaatgaagattaaggtatgggtttacaagaaaacatcg
gaagagaagtttcccactctgaagaaatattctgagaaagcgcctccaacagatagattt
gctacacatgaagtcaaggtggactttgagtataaaagtgttgaagatcctagtaaagtt
gtgcctcctgaccagaggattaagggttatcgttatggccctcaagttattcccatatca
tctgctgaatgggatgctgtcaagttcaagccagaaaagagtgtgaaacttctgggattt
tctgatgctaaaaatataatgcgacattattacatgaaagatgtcaatattttcatccct
gaaccgggtaatacgagggccattcttgctgtttctgccctagcaagagctatgaaagat
atgaataaggtggcaattatgcgctgtgtttggagacaaggacaaggaaatgttgttgtg
ggggtcttaacacctaatgtctcggacaatgacaatatccctgattcattttacttcaat
gtactcccttttgctgaggatgttagggagtttcaattcccatctttcagtaacttcccg
gaatcgtggcaaccaagtgaacaacagcaagaggctgcagatggccttgtcaagatgctt
gaccttgcaccacctggcaaagaggaggctctgctgcctagcttaaccccaaatcctgtc
cttgagcgcttttatcgtcaccttgagttgaagtcaaggcaaccagatgcagttgtacct
ccacttgatgaaactcttaggacgattactgaacctgataaagagcttatttctcaaaac
aagtctattattgatgtctttcatagccggtttgaactcaaagagaacccaaagctgaag
aaatcaagtaggcgatttttgcgagataaaccatctgggtcaaaggagggggaggatcat
cttagcattaccgatggacctaataaggttgagaaaattggggacactactcctgtccag
gattttgaagctatgatcagtcgtagagatagcccaaaatgggttggtaaagcaattaag
gatatgaaaaataaaatacacgacttagtagaggactcttatgaaggggataattattca
aaggcattggaatgtttaattgccctccgcaagggttgtatcctagagcaggaaccaaaa
gagttcaacgatttcctgtgcaatctatgtaaattctgcgaggagaaagcccttggcagt
ttctgtggatttcttgcatccaaggagctcacgttgattcccaagagagaagctatagac
agtgaagttacggatgacgaagctaaaagttttctggtcaaatcagagccaaaattggaa
gcaatgattgagtga
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