KEGG   Malus domestica (apple): 103411642
Entry
103411642         CDS       T03194                                 
Name
(RefSeq) protein PAF1 homolog
  KO
K15174  RNA polymerase II-associated factor 1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103411642
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     103411642
SSDB
Motif
Pfam: Paf1
Other DBs
NCBI-GeneID: 103411642
NCBI-ProteinID: XP_008348493
LinkDB
Position
09:complement(join(18407664..18407801,18407899..18408042,18408164..18408235,18408318..18408386,18408477..18408563,18409499..18409604,18410247..18410366,18410448..18410521,18410611..18410797,18410896..18411003,18411577..18411645,18412056..18413002))
AA seq 706 aa
MASYRPFPPQSSFAPAPNQNPLPPAPPPPQQRGSQYNQNWGYNASSGGSSGGDGAVPAAP
SSYPPNYNYQHSSYGPPRTQHPHPPPQYNYQPPPPPPPEPSYPQPPPPQAPQAAQNQMPL
QPPQAPIYYQNSQYSQYSHQPIQPPPPPPPPLSPNSSVPPPPPPPGSPPPPPPQSKDSGV
DRRSHDKGASREASVSRRREHGHLNHGVPPKQQKPPVPSVPVKKANGPPGRVETEEERRL
RKKREFEKQRQEEKHRQQLKDSQNSVLQKTQMLSSGKGHGSIVGSRMGERRATPFLSGER
TENRLKKPTTFVCKLKFRNELPDPSAQPKLMSLKKENDQYTKYTITSLEKTYKPKLFVEP
DLGIPLDLLDLSVYNPPPPSVRLPLALEDEELLRDDVAVTPVKKDGIRRKERPTDKGVAW
LVKTQYISPLSMESARQSLTEKQAKELREMKGRNILENLNDRERQIKEIEASFEACKSRP
VHATNKNLYAEEVLPLLPDFDRYDDQFVLAAFDGAPTADSEIYSKLDQSGHDAYESRAIM
KSYKVTGVDPANPEKFLAYMVPSPNELSKDPYDESEDVSYSWVREYHYDVRGDDVHDPTT
YLVSFDDDEARYAPLPTKLVLRKKRSKEGKTSDEVEHFPAPARVTVRRRSTVASIELKDA
GDYSRGSISKLKTRGYDVEDTLERPQKIARHQDMDEYSGGDDDLSD
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggcttcatacaggccatttcctccccaatcgtcatttgcgccagcaccgaatcaaaac
cctctaccgccagcaccaccgccaccgcaacagcgaggcagtcagtataaccagaattgg
gggtataatgctagtagtggtggttctagtggcggcgatggtgctgtgccggcggctcct
tcttcgtatccgccaaattacaattaccaacatagtagttatggccctccaagaactcaa
caccctcatccaccaccacaatacaactaccaaccaccgcctccgccaccacccgagcct
tcatacccacagccaccgccccctcaagctcctcaagcagcacaaaatcaaatgccctta
cagcctccacaagcccctatatattaccagaattctcagtattcacagtatagtcaccag
ccaatccagccaccgcctcctcccccaccacctttgtcccccaattcctcggtgccacca
ccacctcctccccccggttcgcctccaccaccgcctcctcaaagtaaggacagcggggta
gataggagatcccatgacaaaggggcttctagggaggcatcagtgtccagaaggcgtgaa
catgggcatttgaatcatggggttcctccaaaacagcagaagcccccagttccttcagtg
ccagtgaagaaagcaaatgggccgccagggagagtggaaacagaggaagagaggagatta
aggaagaagagggagtttgaaaagcaaaggcaagaagagaagcataggcagcagctgaag
gattcccaaaactcagttttgcagaagacgcaaatgttgtcttctggcaagggacatgga
tccattgtggggtcgcgaatgggtgaaaggagagctactccattcttgagtggtgagagg
actgaaaataggctaaagaagccaacaacattcgtatgcaagttgaaattccggaatgaa
cttccagatccaagtgcacagccaaagcttatgtctttgaagaaagagaacgatcagtat
acaaaatacacaataacgtcgttggagaaaacatacaagcccaagctttttgttgagcca
gatcttgggattcctcttgacctactcgacctcagtgtatataatcctcctcctccaagt
gttagactaccactcgctttggaagatgaggaattattgcgggatgatgttgcagtgacc
cctgtgaaaaaggatggcatcaggagaaaagagcggcctactgataaaggagttgcatgg
ctggttaaaacccagtatatatctcctcttagcatggagtctgcaagacagtctttaact
gaaaaacaagcaaaagaactgcgggaaatgaagggccgcaacattttggaaaacctcaat
gacagggaaagacaaatcaaggaaattgaggcatcatttgaggcctgcaagtcacgccct
gttcatgcaaccaacaagaatttgtacgctgaagaagttctacctctgttgcctgatttt
gaccggtacgacgaccaatttgtccttgcagcatttgatggtgctcctactgctgattca
gaaatttacagcaagttggaccagtctggtcatgatgcttatgaatcaagagccattatg
aaaagttacaaagtaacaggtgtagatccagcgaatcctgagaaatttttggcttacatg
gtcccttcacctaatgagctatcaaaagatccctacgatgaatctgaagatgtttcgtat
tcttgggttcgtgagtatcattacgatgtaagaggtgatgatgtgcatgatcccactacg
tacctagtttcatttgatgatgatgaagcacgctatgcgccccttcccacaaagcttgtt
ttaagaaaaaagaggtccaaagagggaaaaaccagtgatgaggttgagcattttcccgca
cctgcgagagtgaccgttaggcggagatcaactgttgcttcaatcgaactaaaggatgca
ggggattattctaggggatctatatcaaaattgaaaacaagaggctatgatgttgaagat
actcttgaaagaccacaaaagattgcacggcaccaagatatggacgaatatagtggtggc
gacgatgatttatcggattaa

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