Malus domestica (apple): 103412422
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Entry
103412422 CDS
T03194
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103412422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103412422
03036 Chromosome and associated proteins [BR:
mdm03036
]
103412422
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103412422
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103412422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EIPR1
WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
103412422
NCBI-ProteinID:
XP_028966164
LinkDB
All DBs
Position
10:complement(join(39006056..39006109,39006262..39006335,39006483..39006714,39006944..39007013,39007309..39007931))
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AA seq
350 aa
AA seq
DB search
MPISEPPQIHRLPQSKYIDSVRWLPPLSALDRLAVIAVFDSDSDSSSVETHSFTPNSATL
TPQSQWVSPSRISSLKTSQSHHKPLVAAATFSGSLHILYGDSMDPAYLQSELSVPEKESH
EGPISCVDVMDGGSECVSVGEDGRVNLVSLGDSELSYRRVFDSGGLVSFTAAKWASPSEF
ATGGYGFSLQWWDQRKHGGAVSQFKGGWSQPSTPGIVHSIDIHPSRKHTCLAGGSLGTVF
AWDLRWPQQPILLSGVGAGEATHSPCESEVWEVQYDHYAKSSNVGNVSSRILPTMICSED
GILAVVEQGEEPIELLAEPCAINSFDIDRQYPSDVICSLEWESIVILTRP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcagagcctccgcagatccaccggctcccacaatccaagtacatagactca
gtccggtggcttccgcctctctccgccttggaccgcctcgccgttattgcagttttcgac
tccgattccgactcttcctccgtagagacccattctttcactccgaactcagcaacccta
accccgcaatctcaatgggtctcgccctcccgaatttcctccctcaaaacctcccaatcc
caccacaaacctctcgtcgccgccgcgacattttccggctccctccatatcttgtacggc
gattcaatggaccctgcgtatctccaatcggagctttcggtgcccgaaaaggagtcacac
gagggacccatttcttgtgtggatgttatggatggtgggtcggagtgtgtgagtgttggg
gaagatgggagggtcaatttggtaagtttaggggactctgagttgagctaccggcgagtt
ttcgacagcggcggcttggtttcgtttaccgcggcgaaatgggcatctccgagtgagttt
gctactggtggatatgggtttagcctccagtggtgggatcagaggaagcacggcggggcg
gtttctcaatttaagggtggctggtctcaaccgtcaactccagggattgtacattcaatt
gatatccatccttcgagaaagcacacttgtttggctggaggttctttagggactgtattt
gcatgggatcttaggtggccacagcagccaatccttctttctggggttggggcaggtgaa
gcaacccattcaccatgcgaaagtgaggtttgggaggttcagtacgaccactatgcaaag
tcttcgaatgtgggaaatgtttcttcacgtatcttacctactatgatatgttcagaagac
ggtatccttgctgttgttgaacaaggtgaggaacccatcgagctcctggcagaaccttgt
gcaatcaacagctttgacatagaccggcaatatccttctgatgttatatgtagcctggag
tgggaatctatagtcatcttgacaaggccatga
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