Malus domestica (apple): 103413157
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Entry
103413157 CDS
T03194
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
mdm03015
mRNA surveillance pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103413157
09122 Translation
03013 Nucleocytoplasmic transport
103413157
03015 mRNA surveillance pathway
103413157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103413157
03041 Spliceosome [BR:
mdm03041
]
103413157
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103413157
Spliceosome [BR:
mdm03041
]
Complex C
Other components
EJC/TREX
103413157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103413157
NCBI-ProteinID:
XP_008349872
LinkDB
All DBs
Position
11:complement(join(25703924..25703969,25704101..25704249,25706245..25706381,25708091..25708367))
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AA seq
202 aa
AA seq
DB search
MASGDVETVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGVGAASAVPKKTKGR
GFREDLNADRNSRLAASDFDSVNSSDGLEPQRSVEGWIILVTGVHEEAQEDHLQDAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFKEAKTAIDKMNGEALLTQVLTVDWAFSNGSFL
DGSRKNSRPLRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagacgtagaaacggtggacttcgagcccgaagatgacgacctcatggac
gaggacggagccgtcgacgccgagccctccgcctcccccagggccccactccccaagctt
aagtccgctatcaccggcgtcggagcggcgtccgccgtccctaagaagaccaaaggtcgc
ggattccgtgaagatcttaatgccgaccgtaacagccgcctcgctgcctccgacttcgac
tctgtcaactcttctgacggcctcgaaccccaacgatccgttgagggatggattattctg
gtcaccggggtacatgaggaggcccaagaggaccacctacaggatgcatttggtgagttt
ggggagataaaaaatttgcatttaaatcttgatcgccgcactgggtttgtgaagggatat
gcactgattgaatatgaaagttttaaagaggcaaaaactgcgatagacaaaatgaacgga
gaggcattgcttacacaagttttaactgttgattgggccttcagcaatggatccttcctt
gatggatccaggaagaactcaagaccactaagagaacgtcgctcaaggagtcctaggagg
agatactaa
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integrated database retrieval system
